Sequence 1: | NP_001138177.1 | Gene: | Ir7f / 7354418 | FlyBaseID: | FBgn0259188 | Length: | 621 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036706.1 | Gene: | Grin2b / 24410 | RGDID: | 2738 | Length: | 1482 | Species: | Rattus norvegicus |
Alignment Length: | 762 | Identity: | 124/762 - (16%) |
---|---|---|---|
Similarity: | 251/762 - (32%) | Gaps: | 261/762 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 GYSIY----KSYLENS----------RIDMQGEDANLYVARALRLVIENVLAQLSTTLVVTISTR 68
Fly 69 HLGTAHWFEYMMNILMD----SWRMVAVQLLRIRPDLV---VNPVPGRKRVSLLMVDSYQGLLDT 126
Fly 127 NITASNANFDDPDYYFIFLQARDHLIPKELQLILDHCLAHFWLHCNVMIQTAQVEVL-VYTYYPY 190
Fly 191 TADACQKA-------------YPIPVNTFDG------------------------RKWKASQMFP 218
Fly 219 DKLSQM------HGCP---------LTVLTWHQPPFV---------------------ELVWDPK 247
Fly 248 HNRSRG------SGFEIQLVEHLARRMNFSLELVNIALLRPNAYRLAEGSSEGPIEKLLQRNVNI 306
Fly 307 SMGYFRKTARRNQLLTTPMSYYSANLVAVLQLERYRIGSLALLVFPFELSVWMLLLLALLIHLGI 371
Fly 372 H---------------LPSARRGNEEDGGGGLQV---VALLLGAAL-----ARLPRSWRHRFIAA 413
Fly 414 HWLWASIPLRISYQSLLFHLIRLQLYNTPSFSLDQLLAEGFQGICTANTQR-------------- 464
Fly 465 -----------------LLLEMPQLARDPDSIQSVDTP------FDWDVLNVLT-RNRNRKIFAV 505
Fly 506 ANQDVTLSFLHSSAHPNAFHVVKQPVNVEYAGMYMPKHSFLYEKMDDDIRRLDASGFIHAWRRAS 570
Fly 571 FASV-HRKEQVHMTSRRYINHAKLSGIYMVMAGLYLLAGLLFAGEVL 616 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir7f | NP_001138177.1 | Periplasmic_Binding_Protein_Type_2 | 231..>358 | CDD:304360 | 20/153 (13%) |
Grin2b | NP_036706.1 | PBP1_iGluR_NMDA_NR2 | 33..393 | CDD:107373 | 50/271 (18%) |
PBP2_iGluR_NMDA_Nr2 | 403..803 | CDD:270436 | 63/438 (14%) | ||
HisJ | <459..>542 | CDD:223904 | 10/84 (12%) | ||
Lig_chan | 557..829 | CDD:278489 | 47/309 (15%) | ||
Pore-forming. /evidence=ECO:0000269|PubMed:24876489, ECO:0000305|PubMed:24876489 | 604..623 | 3/18 (17%) |