DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7f and glr-5

DIOPT Version :9

Sequence 1:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_505244.1 Gene:glr-5 / 179251 WormBaseID:WBGene00001616 Length:932 Species:Caenorhabditis elegans


Alignment Length:500 Identity:103/500 - (20%)
Similarity:168/500 - (33%) Gaps:173/500 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LLDTNITASNANFDDPDYYFIFLQARDHLIPKELQLILDHCLAHFWLHCNVMIQTAQVEVLVYTY 187
            |:|.|          |::.:.||.|       .||:.|.. |.|::|..|:.:.|..:|:..|.:
 Worm   218 LVDMN----------PEHTYTFLLA-------SLQMGLIE-LKHWFLLTNMELSTMDMELFRYNH 264

  Fly   188 ----YPYTADAC-----QKAYPI-------------------------PVNTFDGRKWKASQMFP 218
                .||..|:.     :.|:..                         .|.|||. .:..:.:|.
 Worm   265 ARFISPYPVDSTFLTENRDAFNFSHFKEHITEKWAMKTDNSRNLKMMEAVFTFDA-VYAFANVFN 328

  Fly   219 DKLS--QMHGCPLTVLT---------WHQPPFVELVWDPKHNRSRGSGFEIQLVEHLARRMNFSL 272
            :..|  ||:..|.|:..         .|....::.:   .||...|...:::.:.....:.|||:
 Worm   329 ELSSHMQMNDVPQTLCRKSSRNSRKYQHGRSLIDNI---VHNDLHGLSGDLRRLNGHPLKSNFSM 390

  Fly   273 ---------ELVNIALLRP--NAYRLAEGSSEGPIEKLLQRNVNIS---MGYFRKTARRNQLLTT 323
                     .|.:|....|  |.:....|.|:..    |||||.:|   ..:||.|.    ::..
 Worm   391 RIQLLGYSGRLDDIGFWEPATNVHVNMSGDSKAQ----LQRNVQVSDELKPHFRVTT----IMER 447

  Fly   324 PMSYYSAN---LVAVLQLERYRIGSLALLVFPFELSVWMLLLLALLIHLG----IH-LPSARRGN 380
            |......|   |.|..:.|.:.|..||      |||.          .||    || :...:.||
 Worm   448 PYVMLKKNHYELDANSKFEGFCIDLLA------ELSK----------DLGFTYTIHAVKDGKYGN 496

  Fly   381 EEDGGGGLQVVALLLGAALARLPRSW---RHRFIAAHWLWASIPLRISYQSLLFHLIRLQL--YN 440
            ::.|.|                  ||   ....:......|..||.::|:       |.:.  :.
 Worm   497 DKYGNG------------------SWDGMMGEILRGEAEMAVAPLTVNYR-------RSEAVDFT 536

  Fly   441 TPSFSLDQLLAEGFQGICTANTQRLLLEMPQLARDPDSIQSVDTPFDWDV-----LNVLTRNRNR 500
            .|..||         ||      .:|.::|. .:.|| :.|...|..|.:     .:::|.... 
 Worm   537 KPFLSL---------GI------SILYKVPD-DQQPD-LFSFLNPLSWQIWTAIATSIITVTLG- 583

  Fly   501 KIFAVAN---QDVTLSFLHSSA---HPNAFHVVKQPVNVEYAGMY 539
             ::.|||   .:..|:|...:|   ||.|.....|...:..:..|
 Worm   584 -MYFVANVTPYEWNLNFSCCTAHEPHPAAAFATNQEAPIVMSNNY 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 33/152 (22%)
glr-5NP_505244.1 PBP1_iGluR_delta_like 26..418 CDD:107376 42/221 (19%)
ANF_receptor 38..377 CDD:279440 35/180 (19%)
PBP2_iGluR_Kainate 438..819 CDD:270432 52/253 (21%)
Lig_chan 568..855 CDD:278489 11/61 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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