DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7f and Grik1

DIOPT Version :9

Sequence 1:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster
Sequence 2:XP_006522977.1 Gene:Grik1 / 14805 MGIID:95814 Length:949 Species:Mus musculus


Alignment Length:486 Identity:79/486 - (16%)
Similarity:172/486 - (35%) Gaps:118/486 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 VNTFDGRKWKASQMFPDKLSQMHGCPLTVLTWHQPPFV--ELVWDPKHNRSRGSGFEIQLVEHLA 265
            :|..||.:.:::.: .|.|:..   .|.|.|..:.|:|  .....|.:...|..|:.:.|::.|:
Mouse   427 LNMTDGNRDRSNNI-TDSLANR---TLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELS 487

  Fly   266 RRMNFSLELVNIALLRPNAY--RLAEGSSEGPIEKLLQRNVNISMGYFRKTARRNQLLTTPMSYY 328
            ..:.|   |.::.|:....|  :..:|...|.:::|:....::::.....|..|.:::.....:.
Mouse   488 NILGF---LYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFM 549

  Fly   329 SANLVAVLQLERYRIGSLALLVFPFELSVWMLLLLALLIHLGIHLPSARRGNEEDGGGGLQVVAL 393
            :..:..:.:........:...:.|....:||.:|||.|                    |:..|..
Mouse   550 TLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACL--------------------GVSCVLF 594

  Fly   394 LL-----------------------------------GAALAR----LPRSWRHRFIAAHWLWAS 419
            ::                                   ||.:.:    :|::...|.:...|.:.:
Mouse   595 VIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFT 659

  Fly   420 IPLRISYQSLLFHLIRLQLYNTPSFSLDQLLAEGFQGICTANTQRLLLEMPQLARDPDSI----Q 480
            :.:..||.:.|...:.::...:|..|.|.|            .::..:|...: ||..::    :
Mouse   660 LIIISSYTANLAAFLTVERMESPIDSADDL------------AKQTKIEYGAV-RDGSTMTFFKK 711

  Fly   481 SVDTPFD--WDVL-----NVLTRNRNRKIFAVANQDVTLSFLHSSAHPNAFHVVKQPVNVEYA-- 536
            |..:.::  |..:     :.|.:|.:..|..|...|..|....:|..    :|.::..|:...  
Mouse   712 SKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIE----YVTQRNCNLTQIGG 772

  Fly   537 -------GMYMPKHSFLYEKMDDDIRRLDASGFIHA-----WRRASFASVHRKEQVHMTSRRYIN 589
                   |:..|..|...:|:...|.:|...|.:|.     ||.........||      ...:.
Mouse   773 LIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKE------ASALG 831

  Fly   590 HAKLSGIYMVMAGLYLLAGLLFAGEVLLRQR 620
            ...:.||::|:|...:|:..:..||.:.:.|
Mouse   832 VENIGGIFIVLAAGLVLSVFVAIGEFIYKSR 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 19/130 (15%)
Grik1XP_006522977.1 PBP1_iGluR_Kainate 38..431 CDD:380605 1/3 (33%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:389745 62/411 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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