DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7f and Grid1

DIOPT Version :9

Sequence 1:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_032192.2 Gene:Grid1 / 14803 MGIID:95812 Length:1009 Species:Mus musculus


Alignment Length:766 Identity:142/766 - (18%)
Similarity:248/766 - (32%) Gaps:260/766 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NSRIDMQGEDANLYVARALRL-----VIENVLAQLSTTLVVTISTRHLG---------------- 71
            :|..|::|..:.|..|..|.|     .::..::.:.|:|..|:.|..|.                
Mouse   170 DSEYDIRGLQSFLDQASRLGLDVSLQKVDKNISHVFTSLFTTMKTEELNRYRDTLRRAILLLSPQ 234

  Fly    72 -----------------TAHWF---------EYMMNILMDSWRMVAVQLLRIRPDLVVNP--VPG 108
                             .:||.         |.:..:.....||..|:  :|.|....|.  :..
Mouse   235 GAHSFINEAVETNLASKDSHWVFVNEEISDPEILDLVHSALGRMTVVR--QIFPSAKDNQKCMRN 297

  Fly   109 RKRVSLLMVDSYQGLLDTNITASNANFDDPDYYFIFLQARDHLIPKELQLILDHCLAHF------ 167
            ..|:|.|:.|..:|.|.. :..||....|.   .:.|....|   ::|:....|.:|..      
Mouse   298 NHRISSLLCDPQEGYLQM-LQISNLYLYDS---VLMLANAFH---RKLEDRKWHSMASLNCIRKS 355

  Fly   168 ---WLHCNVMIQT-----------------------AQVEVLVYTYYPYTADACQKAYPIPVNTF 206
               |.....|:.|                       .|.|:|..||               ..||
Mouse   356 TKPWNGGRSMLDTIKKGHITGLTGVMEFREDSSNPYVQFEILGTTY---------------SETF 405

  Fly   207 --DGRK---WKASQMFPDKL------SQMHGCPLTVLTWHQPPFV----ELVWDPKHNRSRGSGF 256
              |.||   |.:.:.....|      |::.|..|.|:|..:.|||    .::..||    |..||
Mouse   406 GKDMRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVMVAENILGQPK----RYKGF 466

  Fly   257 EIQLVEHLARRMNFSLELVNIALLRPN---AYRLAEGSSEGPIEKLLQRNVNISMGYFRKTARRN 318
            .|.:::.||:.:.|..|:..    .|:   .::|...|..|.|.:|:.:..::::.....|..|.
Mouse   467 SIDVLDALAKALGFKYEIYQ----APDGRYGHQLHNTSWNGMIGELISKRADLAISAITITPERE 527

  Fly   319 QLLTTPMSY--YSANLVAVLQLERYRIGSLALLVFPFELSVWMLLLLALLIHLGIHL-------- 373
            .::.....|  ||..::.....|:..|.|   |..||:.:||..:..|:.: :|:.:        
Mouse   528 SVVDFSKRYMDYSVGILIKKPEEKISIFS---LFAPFDFAVWACIAAAIPV-VGVLIFVLNRIQA 588

  Fly   374 ----------PSARR----------GNEEDGGGGLQVVALLLGAALARLPRSWRHRFIAAHWLWA 418
                      |||..          |.....||...|.::.:...:.    ||        ||:.
Mouse   589 VRSQSATQPRPSASATLHSAIWIVYGAFVQQGGESSVNSVAMRIVMG----SW--------WLFT 641

  Fly   419 SI--------------------PLR----------ISY----QSLLFHLIRLQLYNTPSFSLDQL 449
            .|                    |:|          :||    .|.::...|.:  .|.....|..
Mouse   642 LIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQLEMSYGTVRDSAVYEYFRAK--GTNPLEQDST 704

  Fly   450 LAEGFQGI--------CTANTQRLLLEMPQLARDPDSIQSV---DTPFDWDVLNVLTRNRNRKIF 503
            .||.::.|        |.:|..             :.|:..   :..|.|||..|       :..
Mouse   705 FAELWRTISKNGGADNCVSNPS-------------EGIRKAKKGNYAFLWDVAVV-------EYA 749

  Fly   504 AVANQDVTLSFLHSSAHPNAFHVVKQPVNVEYAGMYMPKHSFLYEKMDDDIRRLDASGFIHAW-- 566
            |:.:.|.:::.:.:|.....:.:..|. ...|..::..:...|.:..|.|:.:       ..|  
Mouse   750 ALTDDDCSVTVIGNSISSKGYGIALQH-GSPYRDLFSQRILELQDTGDLDVLK-------QKWWP 806

  Fly   567 --RRASFASVHRKEQVHMTSRRYINHAKLSGIYMVMAGLYLLAGLLFAGEV 615
              .|....| |...|   |..:.:.....:|::.::|...|||.|:.|.|:
Mouse   807 HTGRCDLTS-HSSTQ---TEGKSLKLHSFAGVFCILAIGLLLACLVAALEL 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 32/135 (24%)
Grid1NP_032192.2 Interaction with CBLN1. /evidence=ECO:0000269|PubMed:27418511 21..436 51/289 (18%)
PBP1_iGluR_delta_1 25..423 CDD:107387 49/276 (18%)
PBP2_iGluR_delta_1 436..806 CDD:270448 78/423 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..960
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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