DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and grik5

DIOPT Version :9

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_001315085.1 Gene:grik5 / 798791 ZFINID:ZDB-GENE-070821-6 Length:1067 Species:Danio rerio


Alignment Length:708 Identity:120/708 - (16%)
Similarity:231/708 - (32%) Gaps:259/708 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DLSGEQMNHINEFVARAVLHVVHHYILSVTPSLVLTLCCRSNHTCNFY--NKMMSTLF------- 67
            |:..||.|    .|..::.:..|.:.|....|  |.|..|.....|.|  ..:.|.|.       
Zfish   269 DIVDEQSN----IVGFSMFNTTHPFYLEFIRS--LNLSWREGCDINPYPGPALSSALLFDAVHVV 327

  Fly    68 ----------REWGLAPL------------QIVNVLRGVPWHPVPGRRHFNVIFTDSFAAFEEIR 110
                      :|.|:.||            .::|.||.|.:..:.||..||              
Zfish   328 VSAVQELNRSQEIGVKPLSCTSPQIWQHGTSLMNYLRMVEYDGLTGRVEFN-------------- 378

  Fly   111 MEYYSREYNYNEHYFIFLQARDRLLQGEMRLIFDYCWRYRLIHCSIQVQKSNGDILFYSYYPFGE 175
              ...:..||..|          :|:           ::|..|..|.:..||..:|..|      
Zfish   379 --SKGQRTNYTLH----------ILE-----------KHRGGHKEIGIWYSNNTLLMNS------ 414

  Fly   176 HGCSDMEPQLINRYNGSMLVEPDLFPRKLRNFFGCPLRCALWDVPPFLTLDEDQEEVLRVNGGYE 240
               :.::..:........|:...:    |.|              |::....:.:| ...|..||
Zfish   415 ---TSLDINVSETLANKSLIITTI----LEN--------------PYVMRKINYQE-FEGNEQYE 457

  Fly   241 G---RLLLALAEKMNFTIAVRKVHVNMRDEAL---------------EMLRRDEVDLTLGGIRQT 287
            |   .:|..|::.:.||..::.|     |:.|               |::.| :.||.:.....|
Zfish   458 GFCVDMLRELSDILKFTYRIKLV-----DDGLYGAPEPNGSWTGMVGELINR-KADLAVAAFTIT 516

  Fly   288 VARGMVATSSHNYHQTREVFGVLASS--YEL------SSFDILFYPYRLQIWM-GILGVVALSAL 343
            ..|..|...|       :.|..|..|  |.:      ..|..| .|:...:|: .:|..:|:|.:
Zfish   517 SEREKVIDFS-------KPFMTLGISILYRVHIGRKPGYFSFL-DPFSPAVWLFMLLAYLAVSCV 573

  Fly   344 IQLIVGRM-----------LRER---------MGSRFWLNL-ELVFVGMPLLECPRSHTARLYCV 387
            : .:..|:           ||||         :|:..|..: ..:..|..::  ||:.:.|....
Zfish   574 L-FLSARLSPYEWYNPHPCLRERRDLLENQYTLGNSLWFPVGGFMQQGSEIM--PRALSTRCVSG 635

  Fly   388 MLMMYTLIIRTIYQGLLYHLIRTHQLNRWPQTIESLVQKNFTVVLTPIVQEVLDEIPSVQHMRFR 452
            :...:||||.:.|...|...:...::.                  .||  |..|::....::::.
Zfish   636 VWWAFTLIIISSYTANLAAFLTVQRME------------------VPI--ESPDDLADQTNIQYG 680

  Fly   453 LLEANSELDPLYFLEANHQLRQ----HVTASALDIFIHFNRLSADKVHQRGEQGSGAHFEIVPED 513
            .:...|.:  .:|:.:.:|..|    ::.:....:|:           :..|:|...        
Zfish   681 TIHGGSTM--TFFMNSRYQTYQRMWNYMYSKQPSVFV-----------KSTEEGIAR-------- 724

  Fly   514 IISMQLTMYLAKHSFLI--------------------------------------DQLNEEIMWM 540
            :::       :|::||:                                      |:|:..::.:
Zfish   725 VVN-------SKYAFLLESTMNEYHRSLNCNLTQIGGLLDTKGYGIGMPLGSPFRDELSLAVLQL 782

  Fly   541 RSVGLLSVWSR--WELSESYLRNEQSFQVLGTMELYAIFLMVLVGLIVGLLVFILELV 596
            :....|.:..|  ||..:.....:...:.||...:..||::::.|||:.:.|.::|.|
Zfish   783 QENNRLEILKRRWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFV 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 PBPb 218..>313 CDD:214497 23/112 (21%)
grik5NP_001315085.1 PBP1_iGluR_Kainate_KA1_2 38..412 CDD:107389 36/185 (19%)
ANF_receptor 55..392 CDD:279440 30/154 (19%)
Periplasmic_Binding_Protein_Type_1 <313..383 CDD:299141 14/85 (16%)
Periplasmic_Binding_Protein_Type_2 427..797 CDD:304360 70/453 (15%)
Lig_chan 558..828 CDD:278489 45/320 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591763
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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