DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and grid1b

DIOPT Version :10

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:717 Identity:136/717 - (18%)
Similarity:249/717 - (34%) Gaps:183/717 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NISALLNSYY-DLSGEQMNHINEFVARAVLHVVHHYILS-------VTPSLVLTLCCRSNHTCNF 58
            |||.:.:|.: .:..|::|...:.:.||:|      :||       :..::...|..:.:|....
Zfish   200 NISGVFSSLFTSMRTEELNRYRDTLRRAIL------LLSPRGAQVFIHQAVETNLASKDSHWVFV 258

  Fly    59 YNKMMSTLFREWGLAPLQIVNVLRGVPWHPVPGRRHFNVIFTDSFAAFEEIRMEYYSREYNYNEH 123
            ..::..|...|...:.|..:.|:|.:    .|       ::.||..:.........|...:..|.
Zfish   259 NEEISDTEILELAHSSLGRMTVVRQI----FP-------LWRDSSVSCMRNSHRISSLLCDPQEG 312

  Fly   124 YFIFLQARDRLLQGEM--------RLIFDYCWR-YRLIHCSIQVQKS----NGDILFYSYYPFGE 175
            |...|:..:..|...:        |.:.|..|. ...::|   ::||    ||            
Zfish   313 YLQSLEVSNLYLYDSVLMLANAFYRKLEDRKWHSMASLNC---IRKSTKPWNG------------ 362

  Fly   176 HGCSDMEPQLINRYNG------------SMLVEPDLFPRKLRNFFGCPL-RCALWD--------- 218
             |.|.:|.....|..|            :..|:.::........||..: |.|.||         
Zfish   363 -GWSMLETIQKGRITGLTGIMDFMENGSNSHVQFEILGTSFSETFGKDIKRLATWDSVHGLNGSL 426

  Fly   219 ------------VPPFLTLDED-----QEEVLRVNGGYEG---RLLLALAEKMNFTIAVRKVHVN 263
                        ....:||.||     .|.:|.....|:|   .:|.|||:.:.|...:.:|..:
Zfish   427 KESRIENGMQGVTVKVVTLLEDPFVMVAENILGQPKRYKGFSIDVLEALAKILGFKYDIYQVADS 491

  Fly   264 MRDEAL----------EMLRRDEVDLTLGGIRQTVARGMVATSSHNYHQTREVFGVLASSYE--L 316
            .....|          |::.: ..||.:..|..|..|..|...|..|....  .|:|....|  :
Zfish   492 KYGSQLSNGSWNGMIGELINK-RADLAVSAITITPERENVVDFSKRYMDYS--VGILHRKPEEKI 553

  Fly   317 SSFDILFYPYRLQIWMGILGVVALSALIQLIVGR--MLRER--------------MGSRFWLNLE 365
            :.|. ||.|:.|.:|..|...:.:..::..::.|  |||.:              :.|..|: :.
Zfish   554 NIFS-LFAPFDLAVWACIAAAIPVVGVLIFLLTRMQMLRSQNPPGAHHASSMSNSLHSAIWI-VY 616

  Fly   366 LVFVGMPLLECPRSHTARLYCVMLMMYTLIIRTIYQGLLYHLIRTHQLNRWPQTIESLVQKNFTV 430
            ..||.........|...|:......::|||:.:.|...|...:...:::...:|.:.|.::....
Zfish   617 GAFVQQGGDSVVGSVALRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNTIRTFQDLARQMDFA 681

  Fly   431 VLTPIVQEVLD----------EIPSVQHMRFRLLEANSELD-----PLYFLEANHQLRQHVTASA 480
            ..|.....|.|          |..|.....:|.:..|:..|     |   .|...:.::...|..
Zfish   682 YGTVRDSAVYDYFKAKGTNPLEQDSTYAELWRTISKNNGQDFSVSSP---SEGIRKAKKGPYAFL 743

  Fly   481 LDI-FIHFNRLSADKV------HQRGEQGSGAHFEIVPEDIISMQLTMYLAKH-SFLIDQLNEEI 537
            .|: .:.:..|:.|..      :....:|.|          |:||       | |...|.::::|
Zfish   744 WDMAVVEYAALTDDDCTITVSGNSMSSKGYG----------IAMQ-------HGSPYRDLISQKI 791

  Fly   538 MWMRSVGLLSV-----WSRWELSESYLRNEQSFQVLG-TMELYA---IFLMVLVGLIVGLLVFIL 593
            :.::..|.|.|     |.|  .....|.:..:.|..| :::|::   :|.::..||::..||..|
Zfish   792 LELQEKGDLDVLKQKWWPR--TGRCDLNSHSNAQPDGRSLKLHSFAGVFCILAAGLLLACLVAAL 854

  Fly   594 EL 595
            |:
Zfish   855 EM 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 Periplasmic_Binding_Protein_Type_2 218..>313 CDD:473866 27/133 (20%)
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..426 CDD:380615 46/258 (18%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:473866 77/396 (19%)

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