DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and grik4

DIOPT Version :9

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:XP_021322087.1 Gene:grik4 / 556582 ZFINID:ZDB-GENE-070821-5 Length:965 Species:Danio rerio


Alignment Length:459 Identity:92/459 - (20%)
Similarity:162/459 - (35%) Gaps:136/459 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PFLTLDEDQEEVLRVNGGYEG---RLLLALAEKMNFTIAVRKV----------HVNMRDEALEML 272
            |::.|..:.:| |..|..|||   .:|..||:.:.|...:|.|          :........|::
Zfish   427 PYVMLRANHQE-LEGNDRYEGFCVDMLKELADILKFKYRIRLVGDGVYGVPGANGTWTGMVGELI 490

  Fly   273 RRDEVDLTLGGIRQTVARGMVATSSHNYHQTREVFGVLASS--YEL------SSFDILFYPYRLQ 329
            .| :.||.:..:..|..|..|...|       :.|..|..|  |.:      ..|..| .|:...
Zfish   491 SR-KADLAVAALTITAEREKVIDFS-------KPFMTLGISIMYRVHIGRRPGYFSFL-DPFSPG 546

  Fly   330 IWM-GILGVVALSALIQLIVGRM-----------LRER---------MGSRFWLNLELVFVGMPL 373
            :|: .:|..:|:|.:: .:|.|:           |:.|         :|:.||..:. .|:....
Zfish   547 VWLFMLLAYLAVSCVL-FLVARLTPYEWYNPHPCLKGRCSLLINQYSLGNSFWFPVG-GFMQQGS 609

  Fly   374 LECPRSHTARLYCVMLMMYTLIIRTIYQGLLYHLIRTHQLNRWPQTIESLVQK------------ 426
            ...||:.:.|....:...:||||.:.|...|...:...::....::::.|..:            
Zfish   610 TIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTMHGGS 674

  Fly   427 -----------------NFTVVLTPIVQEVLDEIPSVQHMRFRLLEANSELDPLYFLEA--NHQL 472
                             ||.....|.|     .:.|.:....|:|.:|.    .|.||:  |...
Zfish   675 TMTFFQNSRYQTYQRMWNFMYSKQPSV-----FVKSTEEGIARVLNSNY----AYLLESTMNEYY 730

  Fly   473 RQ---HVT--ASALDIFIHFNRLSADKVHQRGEQGSGAHFEIVPEDIISMQL-TMYLAKHSFLID 531
            ||   ::|  ...||                 .:|.|          |.|.| ::|..:....|.
Zfish   731 RQRNCNLTQIGGLLD-----------------TKGYG----------IGMPLGSVYRDEFDLAIL 768

  Fly   532 QLNEEIMWMRSVGLLSVWSR--WELSESYLRNEQSFQVLGTMELYAIFLMVLVGLIVGLLVFILE 594
            :|.||       ..|.:..|  |:..:.....:...:.||...:..||::::.||:|.:.:.:||
Zfish   769 RLQEE-------NRLEILKRKWWDGGKCPKEEDHRAKGLGMENIGGIFVVLVCGLLVAIFMAVLE 826

  Fly   595 LVSM 598
            .|.|
Zfish   827 FVWM 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 PBPb 218..>313 CDD:214497 24/104 (23%)
grik4XP_021322087.1 Periplasmic_Binding_Protein_Type_1 26..400 CDD:324556
PBP2_iGluR_kainate_KA1 425..785 CDD:270442 80/412 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590978
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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