DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and KaiR1D

DIOPT Version :9

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_650925.1 Gene:KaiR1D / 42473 FlyBaseID:FBgn0038837 Length:853 Species:Drosophila melanogaster


Alignment Length:501 Identity:98/501 - (19%)
Similarity:174/501 - (34%) Gaps:131/501 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 CSDME-PQLINRYN-----GSMLVEPDLFPRKLRNFFGCPLRCALWDVPPFLTLDEDQEEVLRVN 236
            |.:|| |.|.||::     .|.||.....|..|...:...:|  .|....|..:.|:.:.::|: 
  Fly   112 CDNMEIPHLENRWDYRLRRESCLVNLYPHPNTLSKAYVDIVR--HWGWKTFTIIYENNDGIVRL- 173

  Fly   237 GGYEGRLLLALAEKMNFTIAVRKV-----------HVNMRDEALEML-----RRDEVDLTLGGIR 285
                 :.||.......|.|.||::           .:....||..:|     |..||      ::
  Fly   174 -----QELLKAHGMTPFPITVRQLSDSGDYRPLLKQIKNSAEAHIVLDCSTERIHEV------LK 227

  Fly   286 QTVARGMVATSSHNYHQTREVFGVLASSYELSSFDILFYPYRLQIWMGILGVVALSALIQLIVGR 350
            |....||::    :||      ..|.:|.:|.:.::..:.|      |...:.....:.:.||..
  Fly   228 QAQQIGMMS----DYH------SYLVTSLDLHTVNLDEFRY------GGTNITGFRLINEKIVSD 276

  Fly   351 MLRERMGSRFWLNLELVFVGMPLLECPRSHTARLYCVMLMMYTLIIRTIYQGLLYHLIRTHQLNR 415
            ::|:      |...|...:....|...||.||       :||..:  .::...|:.|..:.|::.
  Fly   277 VVRQ------WSIDEKGLLRSANLTTVRSETA-------LMYDAV--HLFAKALHDLDTSQQIDI 326

  Fly   416 WPQTI--ESLVQKNFTVV--LTPIVQEVLDEIPSVQHMRFR------LLEA-----------NSE 459
            .|.:.  :|..|..|:::  :..:..:.|..:....|..||      ::|.           ||.
  Fly   327 HPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQGFRTDFMLDIVELTPAGIRKIGTWNST 391

  Fly   460 L-DPLYFLEANHQLRQHVTA----------------------SALDIF--IHFNRLSADKVHQRG 499
            | |.:.|.....|.:|.:.|                      ||:.:.  ..|...:.|.:|:..
  Fly   392 LPDGINFTRTFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEIS 456

  Fly   500 EQ-GSGAHFEIVPEDIISMQLTMYLAKHSFLIDQLNEEIMWMRSVGLLSVWSR----------WE 553
            :. |.....::||:.... .|.....:.:.:|.:|.|:...:....|...:.|          ..
  Fly   457 KSLGFNYKIQLVPDGSYG-SLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMN 520

  Fly   554 LSESYLRNE------QSFQVLGTMELYAIFLMVLVGLIVGLLVFIL 593
            |..|.|..:      ..|..|..:.|.....|....|.|.:|:|||
  Fly   521 LGVSILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFIL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 PBPb 218..>313 CDD:214497 21/110 (19%)
KaiR1DNP_650925.1 PBP1_iGluR_Kainate 31..397 CDD:107377 67/329 (20%)
ANF_receptor 42..378 CDD:279440 63/310 (20%)
Periplasmic_Binding_Protein_Type_2 415..785 CDD:304360 27/153 (18%)
Lig_chan 547..823 CDD:278489 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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