DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and clumsy

DIOPT Version :9

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster


Alignment Length:482 Identity:87/482 - (18%)
Similarity:173/482 - (35%) Gaps:148/482 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PFLTLDEDQE-EVLRVNGGYEG---RLLLALAEKMNFTI-----------AVRKV---------- 260
            |||||.|.|| |:|..|..|||   .|:..:|:.:||..           |:.||          
  Fly   426 PFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQTWDGIVRQ 490

  Fly   261 ------HVNMRDEALEMLRRDEVD-----LTLGGIRQTVARGMVATSSHNYHQTREVFGVLASSY 314
                  .:.:.|..:...||..||     :|||                        ..:|.|..
  Fly   491 LIDGNADLGICDLTMTSSRRQAVDFTPPFMTLG------------------------ISILFSKP 531

  Fly   315 ELSSFDILFY--PYRLQIWMGILGVVALSALIQLIVGRMLRE------------------RMGSR 359
            .....|:..:  |:.|.:|:.:.......:|:...:.||..:                  .:.:.
  Fly   532 PTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFALARMAPDDWENPHPCKEPEEVENIWSIMNT 596

  Fly   360 FWLNL-ELVFVGMPLLECPRSHTARLYCVMLMMYTLIIRTIY-QGLLYHLIRTHQLNRWPQTIES 422
            .||:: .|:..|..:|  |::.:.||...|...:.|::...| ..|...|..:.|.|    :|.|
  Fly   597 TWLSIGSLMGQGCDIL--PKAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQAN----SINS 655

  Fly   423 LVQKNFTVVLTPIVQEVLDEIPSVQHMRFRLLEANSELDPLYFLEANHQLRQH----VTASALDI 483
                             .:::.:...:::..:...|.:.  :|.::|....|.    :.:::..:
  Fly   656 -----------------AEDLAAQSKIKYGAMAGGSTMG--FFRDSNFSTYQKMWTAMESASPSV 701

  Fly   484 FIHFNRLSADKVHQRGEQGSGAHFEIVPEDIIS---------MQLTMYLAKHSFLI--------- 530
            |...|    |:..:|.::|...:..::....:.         :|:..:|...|:.|         
  Fly   702 FTKTN----DEGVERVQKGKNLYAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYR 762

  Fly   531 DQLNEEIMWMRSVGLLSVWSR--WELSESYLRNEQSFQ------VLGTMELYAIFLMVLVGL--- 584
            .|::..::.:..:|.|:...|  |:........|:|.:      .||...:..:||::.:||   
  Fly   763 KQISAAVLKLGELGQLAELKRKWWKEMHGGGNCEKSDEDGGDTPELGLENVGGVFLVLGLGLLSA 827

  Fly   585 -IVGLLVFILELVSM---RSIYLRKLF 607
             ::|...|:..:.|:   ..|.|::.|
  Fly   828 MVLGCTEFLWNVKSVAIEEKISLKEAF 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 PBPb 218..>313 CDD:214497 30/127 (24%)
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377
ANF_receptor 39..379 CDD:279440
PBP2_iGluR_Kainate 414..787 CDD:270432 72/413 (17%)
Lig_chan 548..812 CDD:278489 43/292 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462654
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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