DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and Nmdar2

DIOPT Version :9

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_001014714.1 Gene:Nmdar2 / 31107 FlyBaseID:FBgn0053513 Length:1083 Species:Drosophila melanogaster


Alignment Length:881 Identity:148/881 - (16%)
Similarity:272/881 - (30%) Gaps:340/881 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ALLNSYYDLSGEQMNHINEFVARAVLHVVHHYILSVTPS---LVLTLC---CRSNHTCNFY---- 59
            |.|....|.|.||.|             :|..::|:|||   ::.|||   .|.|.:...|    
  Fly   134 AKLTFLKDYSFEQKN-------------IHFDMMSLTPSPTAILSTLCKEFLRVNVSAILYMMNN 185

  Fly    60 ---------------------------NKMMSTLFREWGLAPLQI-------------VNVLRGV 84
                                       |...|.|.|....:.||:             :::|...
  Fly   186 EQFGHSTASAQYFLQLAGYLGIPVISWNADNSGLERRASQSTLQLQLAPSIEHQSAAMLSILERY 250

  Fly    85 PWHPVPGRRHFNVIFTDSFAAFEEIRMEYYSREYNYNEHY-FIFL-----------------QAR 131
            .||      .|:|: |...|..::.......|.....||: |..|                 :||
  Fly   251 KWH------QFSVV-TSQIAGHDDFVQAVRERVAEMQEHFKFTILNSIVVTRTSDLMELVNSEAR 308

  Fly   132 DRLLQG-------------EMRLIFD-YCWRYRLIHCSIQVQKSNGDILFYSYYPFGEHGC--SD 180
            ..||..             ||:|..: |.|   ::..|: ::|.:.    :|.:|.|..|.  ..
  Fly   309 VMLLYATQTEAITILRAAEEMKLTGENYVW---VVSQSV-IEKKDA----HSQFPVGMLGVHFDT 365

  Fly   181 MEPQLINRYNGSM----------LVEP-------------------------DLFPRKLRNF--- 207
            ....|:|..:.::          |.:|                         ::|.:.|||.   
  Fly   366 SSAALMNEISNAIKIYSYGVEAYLTDPANRDRRLTTQSLSCEDEGRGRWDNGEIFFKYLRNVSIE 430

  Fly   208 --FGCP---------LRCA----------------LWD--------------------------- 218
              ...|         ||.|                :|:                           
  Fly   431 GDLNKPNIEFTADGDLRSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAP 495

  Fly   219 ---VP-------------PFLTLD--------------------EDQEEVLRVNGGYEGR----- 242
               ||             |::.|.                    .|.|....::.|...|     
  Fly   496 PQGVPEKFHLKITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFY 560

  Fly   243 ---------LLLALAEKMNFTIAVRKVH-------VNMRDEAL--EMLRRDEVDLTLGGIRQTVA 289
                     ||...||::.||..:.:|.       .|.:...|  :::.| :.|:.|..:.....
  Fly   561 QCCSGFCIDLLEKFAEELGFTYELVRVEDGKWGTLENGKWNGLIADLVNR-KTDMVLTSLMINTE 624

  Fly   290 RGMVATSSHNYHQTREVFGVLASSYELSSFDILFYPYRLQIWMGILGVVALSALIQLIV------ 348
            |..|...|..:.:| .:..|:|....:.|......|:....|| ::|:||:.|...:|.      
  Fly   625 REAVVDFSEPFMET-GIAIVVAKRTGIISPTAFLEPFDTASWM-LVGIVAIQAATFMIFLFEWLS 687

  Fly   349 --GRML------------RERMGSRFWLNLELVFVGMPLLECPRSHTARLYCVMLMMYTLIIRTI 399
              |..:            |..:...:||...::|.....::.||..|:|....:..::.::...|
  Fly   688 PSGYDMKLYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAI 752

  Fly   400 Y-QGLLYHLIRTHQLNRWPQTIESLVQKNFTVVLTPIVQEVLDEIPSVQHMRFRLLEANSELDPL 463
            | ..|...:|...:.:.:....:|.:...|:            ..||.:.........:|.:.. 
  Fly   753 YTANLAAFMITREEFHEFSGLNDSRLVHPFS------------HKPSFKFGTIPYSHTDSTIHK- 804

  Fly   464 YFLEANHQLRQHVTASA-----------LDIFIHFNRLSADKVHQRGEQGSGAHFEIVPEDIISM 517
            ||...::.:||:...|.           ||.||:              .|:...:.:..::...:
  Fly   805 YFNVMHNYMRQYNKTSVADGVAAVLNGNLDSFIY--------------DGTVLDYLVAQDEDCRL 855

  Fly   518 Q-------LTMY---LAKHSFLIDQLNEEIMWMRSVGLLSVWSRWELSESYLRNEQ---SFQVLG 569
            .       :|.|   .:::|..:...|:.::..|:.|.|....|:.::.:....:|   |...|.
  Fly   856 MTVGSWYAMTGYGLAFSRNSKYVQMFNKRLLEFRANGDLERLRRYWMTGTCRPGKQEHKSSDPLA 920

  Fly   570 TMELYAIFLMVLVGLIVGLLVFILELVSMRSIYLRK 605
            ..:..:.||:::.|:::..|:.:||.|..:  |:||
  Fly   921 LEQFLSAFLLLMAGILLAALLLLLEHVYFK--YIRK 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 PBPb 218..>313 CDD:214497 26/180 (14%)
Nmdar2NP_001014714.1 PBP1_iGluR_NMDA_NR2 99..490 CDD:107373 64/383 (17%)
PBP2_iGluR_NMDA_Nr2 502..908 CDD:270436 69/435 (16%)
Lig_chan 665..928 CDD:278489 46/290 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463026
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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