DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and Grin2d

DIOPT Version :9

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:XP_036008580.1 Gene:Grin2d / 14814 MGIID:95823 Length:1345 Species:Mus musculus


Alignment Length:629 Identity:122/629 - (19%)
Similarity:205/629 - (32%) Gaps:179/629 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LFREWGLAP-----LQIVN-VLRGVPWHPVPGRRHFNVIFTDSFAAFEEIRMEYYSREYNYNEHY 124
            |.|::|..|     .:..| ..||...|     |:|..|..|             :|:|::||..
Mouse   336 LLRDYGFLPELGHDCRAQNRTHRGESLH-----RYFMNITWD-------------NRDYSFNEDG 382

  Fly   125 F-------IFLQARDRLL-------QGEMRLIFDYCWRY-RLI-------HCSIQVQKSNGDILF 167
            |       :....|||..       |..:||.:....|| |.:       |.::...:....::.
Mouse   383 FLVNPSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSRYGRFLQPVDDTQHLTVATLEERPFVIV 447

  Fly   168 YSYYPFGEHGCSDMEP--QLINRYNGSMLVEPDLFPRKLRNFFGCPLRCALWDVPPFLTLDEDQE 230
            ....|.......|..|  ..:||.:.  ||.|.                   ..||    |..:.
Mouse   448 EPADPISGTCIRDSVPCRSQLNRTHS--LVAPR-------------------SPPP----DAPRP 487

  Fly   231 EVLRVNGGYEGRLLLALAEKMNFTIAVRKVHVNMRDEALE-----MLRR---DEVDLTLGGIRQT 287
            | .|...|:...:|..||..:.|:..:..|......:.::     |:..   ...|:.:|.:...
Mouse   488 E-KRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTIN 551

  Fly   288 VARGMVATSSHNYHQTREVFGVLASSYELSSFDILFY----------PYRLQIWMGI----LGVV 338
            ..|..:...|..:.:|.....|..|:..:|....|.:          ||...:|:.:    |.||
Mouse   552 EERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLAFAWLMPPMSPEPYSPAVWVMMFVMCLTVV 616

  Fly   339 ALSALI-----------QLIVGRM---LRERMGSRFWLNLELVFVGMPLLECPRSHTARLYCVML 389
            |::..|           .|..|:.   ....:|...||...|||.....:|.||..|:::..::.
Mouse   617 AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVW 681

  Fly   390 MMYTLIIRTIY-QGLLYHLIRTHQLNRWPQTIESLVQKNF-------------TVVLTPIVQEVL 440
            ..:.:|....| ..|...:|:    ..:..|:..|..:.|             ||......:.:.
Mouse   682 AFFAVIFLASYTANLAAFMIQ----EEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKNIR 742

  Fly   441 DEIPSVQHMRFRLLEANSELDPLYFLEANHQLRQHVTASALDIFIH----FNRLS-ADKVHQRGE 500
            ...|.:.....|..:...|       ||..||:    |..||.||:    .|.:: .|:..:...
Mouse   743 SNYPDMHSYMVRYNQPRVE-------EALTQLK----AGKLDAFIYDAAVLNYMARKDEGCKLVT 796

  Fly   501 QGSGAHFEIVPEDI-----------ISMQLTMYLAKHSFLIDQLNEEIMWMRSVGLLSVWSRWEL 554
            .|||..|......|           |.:.|..:|....  |:.|  |.:|:              
Mouse   797 IGSGKVFATTGYGIALHKGSRWKRPIDLALLQFLGDDE--IEML--ERLWL-------------- 843

  Fly   555 SESYLRNEQSFQVLGTM----ELYAIFLMVLVGLIVGLLVFILE 594
              |.:.:....:|:.:.    .:..:|.|:||.:.:.||||..|
Mouse   844 --SGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWE 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 PBPb 218..>313 CDD:214497 18/102 (18%)
Grin2dXP_036008580.1 Periplasmic_Binding_Protein_type1 <156..415 CDD:415822 23/96 (24%)
PBP2_iGluR_NMDA_Nr2 432..849 CDD:270436 86/477 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846595
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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