DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and Grik4

DIOPT Version :9

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_780690.2 Gene:Grik4 / 110637 MGIID:95817 Length:956 Species:Mus musculus


Alignment Length:449 Identity:81/449 - (18%)
Similarity:160/449 - (35%) Gaps:120/449 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PFLTLDEDQEEVLRVNGGYEG---RLLLALAEKMNFTIAVRKV--------HVNMRDEAL--EML 272
            |:|.|..:.:| :..|..|||   .:|..|||.:.|...:|.|        ..|.....:  |::
Mouse   427 PYLMLKGNHQE-MEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELI 490

  Fly   273 RRDEVDLTLGGIRQTVARGMVATSS-----------HNYHQTREVFGVLASSYELSSFDILFYPY 326
            .| :.||.:.|:..|..|..|...|           :..|..|.      ..| .|..|    |:
Mouse   491 AR-KADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRR------PGY-FSFLD----PF 543

  Fly   327 RLQIWM-GILGVVALSALIQLIV---------------GR----MLRERMGSRFWLNLELVFVGM 371
            ...:|: .:|..:|:|.::.|:.               ||    :.:..:|:..|..:. .|:..
Mouse   544 SPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVG-GFMQQ 607

  Fly   372 PLLECPRSHTARLYCVMLMMYTLIIRTIYQGLLYHLIRTHQLNRWPQTIESLVQKNFTVVLTPIV 436
            .....||:.:.|....:...:||||.:.|...|...:...::.                  .|| 
Mouse   608 GSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRME------------------VPI- 653

  Fly   437 QEVLDEIPSVQHMRFRLLEANSELDPLYFLEANHQLRQ----HVTASALDIFIHFNRLSADKVHQ 497
             |.:|::.....:.:..:...|.:  .:|..:.:|..|    ::.:....:|:           :
Mouse   654 -ESVDDLADQTAIEYGTIHGGSSM--TFFQNSRYQTYQRMWNYMYSKQPSVFV-----------K 704

  Fly   498 RGEQG----SGAHFEIVPEDII-------SMQLTMY------------LAKHSFLIDQLNEEIMW 539
            ..|:|    ..:::..:.|..:       :..||..            :...|...|:.:..|:.
Mouse   705 STEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQ 769

  Fly   540 MRSVGLLSVWSR--WELSESYLRNEQSFQVLGTMELYAIFLMVLVGLIVGLLVFILELV 596
            ::....|.:..|  ||..:.....:...:.||...:..||::::.||||.:.:.:||.:
Mouse   770 LQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFL 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 PBPb 218..>313 CDD:214497 27/115 (23%)
Grik4NP_780690.2 Periplasmic_Binding_Protein_type1 24..402 CDD:385651
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 69/404 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846219
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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