DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and Grik4

DIOPT Version :10

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_780690.2 Gene:Grik4 / 110637 MGIID:95817 Length:956 Species:Mus musculus


Alignment Length:449 Identity:81/449 - (18%)
Similarity:160/449 - (35%) Gaps:120/449 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PFLTLDEDQEEVLRVNGGYEG---RLLLALAEKMNFTIAVRKV--------HVNMRDEAL--EML 272
            |:|.|..:.:| :..|..|||   .:|..|||.:.|...:|.|        ..|.....:  |::
Mouse   427 PYLMLKGNHQE-MEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELI 490

  Fly   273 RRDEVDLTLGGIRQTVARGMVATSS-----------HNYHQTREVFGVLASSYELSSFDILFYPY 326
            .| :.||.:.|:..|..|..|...|           :..|..|.      ..| .|..|    |:
Mouse   491 AR-KADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRR------PGY-FSFLD----PF 543

  Fly   327 RLQIWM-GILGVVALSALIQLIV---------------GR----MLRERMGSRFWLNLELVFVGM 371
            ...:|: .:|..:|:|.::.|:.               ||    :.:..:|:..|..:. .|:..
Mouse   544 SPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVG-GFMQQ 607

  Fly   372 PLLECPRSHTARLYCVMLMMYTLIIRTIYQGLLYHLIRTHQLNRWPQTIESLVQKNFTVVLTPIV 436
            .....||:.:.|....:...:||||.:.|...|...:...::.                  .|| 
Mouse   608 GSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRME------------------VPI- 653

  Fly   437 QEVLDEIPSVQHMRFRLLEANSELDPLYFLEANHQLRQ----HVTASALDIFIHFNRLSADKVHQ 497
             |.:|::.....:.:..:...|.:  .:|..:.:|..|    ::.:....:|:           :
Mouse   654 -ESVDDLADQTAIEYGTIHGGSSM--TFFQNSRYQTYQRMWNYMYSKQPSVFV-----------K 704

  Fly   498 RGEQG----SGAHFEIVPEDII-------SMQLTMY------------LAKHSFLIDQLNEEIMW 539
            ..|:|    ..:::..:.|..:       :..||..            :...|...|:.:..|:.
Mouse   705 STEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQ 769

  Fly   540 MRSVGLLSVWSR--WELSESYLRNEQSFQVLGTMELYAIFLMVLVGLIVGLLVFILELV 596
            ::....|.:..|  ||..:.....:...:.||...:..||::::.||||.:.:.:||.:
Mouse   770 LQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFL 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 Periplasmic_Binding_Protein_Type_2 218..>313 CDD:473866 27/115 (23%)
Grik4NP_780690.2 Periplasmic_Binding_Protein_type1 24..402 CDD:471960
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 69/404 (17%)
QRL_CxxC_CxxC 863..927 CDD:469521
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

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