DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7e and grid2

DIOPT Version :9

Sequence 1:NP_001138176.1 Gene:Ir7e / 7354417 FlyBaseID:FBgn0259189 Length:608 Species:Drosophila melanogaster
Sequence 2:XP_031759030.1 Gene:grid2 / 100487676 XenbaseID:XB-GENE-955038 Length:1007 Species:Xenopus tropicalis


Alignment Length:490 Identity:97/490 - (19%)
Similarity:163/490 - (33%) Gaps:148/490 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 NGSMLVEPDLFPRKL-RNFFGCPLRCALWDVPPFLTLDEDQEEVLRVNGGYEG---RLLLALAEK 250
            |||      |..||| .|..|..||.|.....||:.:.|:   ||.....|:|   .:|.||:..
 Frog   426 NGS------LTDRKLENNMRGVVLRVATVLEEPFVMVSEN---VLGKPKKYQGFSIDVLDALSSY 481

  Fly   251 MNF--TIAVRKVHVNMRDEA-------LEMLRRDEVDLTLGGIRQTVARGMVATSSHNY------ 300
            :.|  .|.|...|.....:|       :..|.....|:.:..:..|..|..|...:..|      
 Frog   482 LGFKYEIYVASDHKYGSPQADGSWNGLIGELLLKRADMGISALTITPDRENVVDFTTRYMDYSVG 546

  Fly   301 ------HQTREVFGVLASSYELSSFDILFYPYRLQIWMGILGVVALSALI----------QLIVG 349
                  .:|.::|..||             |:.|.:|..|.|.|.|..|:          :|.:|
 Frog   547 VLLRKAEKTVDMFACLA-------------PFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMG 598

  Fly   350 RM---------------------------LRERMGSRFWLNLELVFVGMPLLECPRSHTARLYCV 387
            .|                           |..||....|....|:.:.        |:||.|...
 Frog   599 SMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVIS--------SYTANLAAF 655

  Fly   388 M--------------LMMYTLI-IRTIYQGLLYHLIRTHQLNRWPQTIESLVQKNFTVV-----L 432
            :              |...|.| ..|::...:|..:|...:|  |...:|:..:.:.::     .
 Frog   656 LTISRIESSIQSLQDLSRQTDIPYGTVFDSAVYEHVRVKGMN--PFERDSMYSQMWRMINRSNGS 718

  Fly   433 TPIVQEVLDEIPSVQHMRFRLLEANSELDPLYFLEANHQLRQHVTASALDI-FIHFNRLSADKVH 496
            ...|||.|:.|..|:|..:..:...:.|:   ::..|.|          |. |.......||:.:
 Frog   719 ENNVQESLEGIQKVKHGNYAFVWDAAVLE---YIAINDQ----------DCSFYTVGNTIADRGY 770

  Fly   497 QRGEQGSGAHFEIVPEDIISMQLT--MYLAKHSFLIDQLNEEIMWMRSVGLLSVWSRWELSESYL 559
            ....|....:.:|..:.|:.:|..  |.:.||.:          |.|:       .:.||..| :
 Frog   771 GIALQHGSPYRDIFSQRILELQQNGDMDILKHKW----------WPRN-------GQCELHSS-M 817

  Fly   560 RNEQSFQVLGTMELYAIFLMVLVGLIVGLLVFILE 594
            ..:|....|.......:|.::..|:::...:.::|
 Frog   818 DTKQKGSSLDIKSFSGVFCILAAGIVLSCFIAMVE 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7eNP_001138176.1 PBPb 218..>313 CDD:214497 25/118 (21%)
grid2XP_031759030.1 Periplasmic_Binding_Protein_type1 28..429 CDD:415822 3/8 (38%)
PBP2_iGluR_delta_2 440..806 CDD:270449 79/414 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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