DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and grid2

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:695 Identity:135/695 - (19%)
Similarity:227/695 - (32%) Gaps:240/695 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ISATLQKIFINGLAVYNFGVF------ISTSYEEMDRD--------RVILVHQV----------- 74
            :|....|.||..:...|...|      |:....:||..        |:.||.|.           
Zfish   234 MSPATAKAFITEVVETNLVAFDCQWIIINEEISDMDVQELVMKSIGRLTLVRQTFPLPQNTSQRC 298

  Fly    75 ------LNRNLYPPNFPVA--------------VVLASKMNRKITAQVFTQLLFV---------- 109
                  :|.:|..|..|.|              ::||:..:||:..:.:..:..:          
Zfish   299 VRNNHRINTSLCDPKDPKAQMLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLSCIRKGSKPW 363

  Fly   110 QNAEQAIAIAEGVNRNGLCVIVLLTSQPERPIMTKIFTYFMQERYNINVVIL-----------VP 163
            |..:..:...:....:||..::........|              ||:..||           |.
Zfish   364 QGGKSMLETVKKGGVSGLTSLLEFNDNGSNP--------------NIHFEILGTNYGEDRGRGVS 414

  Fly   164 RL------HGVQAFNVRPYTPTSCSSLEPVEIDIKDGDLWDVFPRRLK-NLHGCPLSVIVWDIPP 221
            ||      ||:                        :|.|.|   |:|: |:.|..|.|:.....|
Zfish   415 RLATWDPIHGL------------------------NGTLTD---RKLENNMRGVVLRVVTVLEEP 452

  Fly   222 YMRINWK-----------SSDPMDGLDGLDGLLLRIVARKMNFTLKLIPNEPNGLIGGSSFMNGT 275
            ::.::..           |.|.:|.|....|         ..:.:.:.|:...    ||...:||
Zfish   453 FVMVSENVLGKPKKYQGFSIDVLDALANYLG---------FKYEIYVAPDHKY----GSQQADGT 504

  Fly   276 FTGAYKMLRERRANITIGCAACTPERSTFLEATSPYSQMSYIIVLQARGGYSIYEVMLFPFEKYT 340
            :.|....|..:||::.:.....||||.:.::.|:.|...|..::|:...........|.||:...
Zfish   505 WNGLIGELVFKRADVGLSALTITPERESVVDFTTRYMDYSVGVLLRKAERTVDMFACLAPFDLSL 569

  Fly   341 W-------LLLSTILG-LHW---------------IVGSRW-----------RMPSPILAG---- 367
            |       ||:.|::. |:|               :..|.|           .:|...||.    
Zfish   570 WACIAGTVLLVGTLVYLLNWLNPPRLPMGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMM 634

  Fly   368 --WMLWIFVIRASYEASVFNFIQNSPVKPSPRTL--------------------DQALSGGFR-F 409
              |.|:..::.:||.|::..|:..|.::.|.::|                    ||..|.|.. |
Zfish   635 GVWWLFALIVISSYTANLAAFLTISRIENSIQSLQDLAKQTDLPYGTVLDSAVYDQVRSKGMNPF 699

  Fly   410 ITDHASYRMTLKIPSFQGKTLISAGQPVDVFDALLKAPWKTGAFTSRAFLADHLVRHRKHRN--- 471
            ..|....:|...|    .:|..:.....:..:.:.|.  |.|.|   ||:.|..|......|   
Zfish   700 ERDPMYSQMWRMI----NRTGGAENNVEESKEGIRKV--KYGRF---AFVWDAAVLEYVAINDED 755

  Fly   472 -QLVILAEKIVDNMLCMYFPHGSYFAWEINKLLFNMRSFGIFQHHSQ---ILAWDNLPTTTDTDT 532
             .|..::..:.|....|...|||.:     :.:|:.|...:.|:...   .|.|....:..|..:
Zfish   756 CSLYTVSNNVADRGYGMAMQHGSPY-----RDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYS 815

  Fly   533 P-GKR-------IHSSTESVATGFAESMSFVVAA---LNCLMGAL 566
            | |.|       |||        || .:.||:||   |:||:..:
Zfish   816 PVGTRKSGSALDIHS--------FA-GVFFVLAAGVVLSCLIATV 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..427 CDD:107386 35/230 (15%)
ANF_receptor 42..404 CDD:279440 30/183 (16%)
PBP2_iGluR_delta_2 440..806 CDD:270449 78/392 (20%)
Lig_chan 568..841 CDD:278489 61/295 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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