DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7d and GluRIID

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster


Alignment Length:419 Identity:82/419 - (19%)
Similarity:138/419 - (32%) Gaps:161/419 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 VQNAEQAIAIAEGVNRNGLCVIVL---LTSQPERPI--MTKIFTYFMQ-----ERYNINVVILVP 163
            ::...|.:..:|.|| :|...|.:   ||....|.|  .||...|..|     ||::        
  Fly   280 MEKLHQELGESEPVN-SGSTFITMEMALTYDAVRVIAETTKHLPYQPQMLNCSERHD-------- 335

  Fly   164 RLHGVQAFNVRPYTPTSCSSLEPVEI-------------DIKDGDLWDVFPRRLKNLHGCPLSVI 215
                    ||:|...|..:.:..:||             :::.|..:||...:...|    :.|.
  Fly   336 --------NVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNVRKGFTFDVIELQTSGL----VKVG 388

  Fly   216 VWD--------IPPYMRINWKSSDPMDG---------------------LDGLDGL--------- 242
            .|:        .|| ..:|:...|  ||                     ::.:|.|         
  Fly   389 TWEEGKDFEFQRPP-QAVNFNDID--DGSLVNKTFIVLISVATKPYASLVESIDTLIGNNQFQGY 450

  Fly   243 ---LLRIVARKM--NFTLKLIPNEPNGLIGGSSFMNGTF-------TGAYKMLRERRANITIGCA 295
               |::.:|.|:  |||.:         .||:.:  |:|       :|..|.:.|.||::.|...
  Fly   451 GVDLIKELADKLGFNFTFR---------DGGNDY--GSFNKTTNSTSGMLKEIVEGRADLAITDL 504

  Fly   296 ACTPERSTFLEATSPYSQMSYII--VLQARGGYSIYEVMLFPFEKYTWLLLS-TILGL---HWIV 354
            ..|.||...::.:.|:..:...|  |...:...:::..| .||....||.|. ..||:   .:|:
  Fly   505 TITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSFM-DPFSSEVWLYLGIAYLGVSLCFFII 568

  Fly   355 GS----RWRMPSP-----------------------------------------ILAGWMLWIFV 374
            |.    .|..|.|                                         |.|.|..:..:
  Fly   569 GRLSPIEWDNPYPCIEEPEELENQFTINNSLWFTTGALLQQGSEIAPKALSTRTISAIWWFFTLI 633

  Fly   375 IRASYEASVFNFIQ-NSPVKPSPRTLDQA 402
            :.:||.|::..|:. .:|..|.....|.|
  Fly   634 MVSSYTANLAAFLTIENPTSPINSVKDLA 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 28/137 (20%)
ANF_receptor 46..380 CDD:279440 25/116 (22%)
PBP2_iGluR_Kainate 417..788 CDD:270432 48/258 (19%)
Lig_chan 549..819 CDD:278489 21/114 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462859
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.