DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and Ekar

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:787 Identity:139/787 - (17%)
Similarity:244/787 - (31%) Gaps:277/787 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LCK-----VQAVVWPHQHLLEEQLASQISATLQKIFIN--GLAVYNFGVFISTSYEEMDRDRVIL 70
            :||     ||||..|    .:..||:.|::....:.|.  |.:.::|.:.:..|.:        |
  Fly    80 VCKLIRVGVQAVFSP----TDSVLATHINSICDALDIPNIGRSAHDFSINVYPSKQ--------L 132

  Fly    71 VHQVLNRNLYPPNFPVAVVLASKMN------------------RKITAQVFTQLLFVQNAEQAIA 117
            |:...|..:...|:....:|..|.|                  |:::...:...|.....::...
  Fly   133 VNYAFNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGEVHMRQVSRDSYVSALNEFKGKEIHN 197

  Fly   118 IAEGVNRNGLCVIV--LLTSQPERPIMTKIFTYFMQERYNINVVILVPRLHGVQAFNVRPYTPTS 180
            |....|.||:.:::  :|..|........:||.|..|.|::            :.|.......||
  Fly   198 IIIDTNSNGISILLKNILQQQMNEYKYHYLFTSFDLETYDL------------EDFKYNFVNITS 250

  Fly   181 CSSLEPVEIDI----KDGDLWD--VFPRRLKNLHGCPLSVIV----------------------- 216
            ...::..::.:    ||..|:.  :|.:...||| ...|.|:                       
  Fly   251 FRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLH-IKKSTILESEPALMFDSVYVFAIGLQTLEQ 314

  Fly   217 ----------------WD----IPPYMR-INWKS-SDPMDGLDG------LDGLLLR---IV--- 247
                            ||    :..|:. :.||. :.|:...||      ||.:.|:   ||   
  Fly   315 SHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSIVKVG 379

  Fly   248 ------------------ARKMNFTLKLIP-----------------NE---------------- 261
                              |..||.||.:|.                 ||                
  Fly   380 EWTPHGHLNITEPSMFFDAGSMNVTLVVITILETPYVMMHYGKNFTGNERFYGFCVDILETISRE 444

  Fly   262 ----------PNGLIGGSSFMNGTFTGAYKMLRERRANITIGCAACTPERSTFLEATSPYSQMS- 315
                      |:...|......|.:.|....|.:.:|::.:|....|..|.:.::.|.|:..:. 
  Fly   445 VGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGI 509

  Fly   316 ---------------------------YIIVLQARGGYSIYEV-MLFPFEKYTWLLLS------- 345
                                       |:::........||.| .|.|.|   |..::       
  Fly   510 SILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPIE---WKCINACDLENI 571

  Fly   346 ------TILGLHWIVGSRWRMPSP-----------ILAGWMLWIFVIRASYEAS---------VF 384
                  ::....|.....:...||           |.:.|..:..:|.|||.|:         :.
  Fly   572 SIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMI 636

  Fly   385 NFIQN-----SPVKPSPRTLDQALSGG-FRFITDHA--SYR-----MTLKIPSFQGKTLISAGQP 436
            |.|:|     |..:.|..|||   ||. ..|..|..  :|:     |..|.||....|       
  Fly   637 NPIENAEDLASQTEISYGTLD---SGSTMTFFRDSVIETYKKIWRSMDNKKPSAFTTT------- 691

  Fly   437 VDVFDALLKAPWKTGAFTSRAFLADHLVRHRKHRNQLVILAEKIVDNMLCMYFPHGSYFAWEINK 501
              ..|.:.:......||...:.:.|::|:...:..|:..|.:   .....:..|.||.:..:|:.
  Fly   692 --YEDGIKRVNQGNYAFLMESTMLDYIVQRDCNLTQIGGLLD---TKGYGIATPKGSPWRDKISL 751

  Fly   502 LLFNMRSFGIFQHHSQILAWDNLPTTTDTDTPGKRIHSSTESVATGFAESMSFVVAALNCLMGAL 566
            .:..::..|..|     :.:|.....||.....|.....:::.:.|. ||:..|...|  :.|.:
  Fly   752 AILELQERGDIQ-----MLYDKWWKNTDETCTRKNTSKQSKANSLGL-ESIGGVFVVL--IAGII 808

  Fly   567 CISIVVF 573
            ..::|.|
  Fly   809 VAAVVAF 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 59/332 (18%)
ANF_receptor 39..371 CDD:279440 56/315 (18%)
PBP2_iGluR_Kainate 402..771 CDD:270432 67/391 (17%)
Lig_chan 533..807 CDD:278489 58/299 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463104
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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