DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and GluRIIE

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001036733.1 Gene:GluRIIE / 318623 FlyBaseID:FBgn0051201 Length:897 Species:Drosophila melanogaster


Alignment Length:690 Identity:144/690 - (20%)
Similarity:238/690 - (34%) Gaps:222/690 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 HQHLLEEQLASQISATLQKIFINGLAVYNFGVFISTSYEEMDRDRVILVHQVLNRNLYPP----- 82
            |...|||...|:.:.|..::|               |.|:|      .|.::|.:..||.     
  Fly   252 HSFDLEEYKYSEANITGLRLF---------------SPEKM------AVKELLMKLGYPTDQDEF 295

  Fly    83 ---NFPVAVVLASKMNRKITAQVFTQLL-------FVQNAEQAIAIAEGVN------RNGLCVIV 131
               :.|:.|.:|...:   ..|:|.|.|       ..||..|.   .|.|.      :|.:..:.
  Fly   296 RNGSCPITVEMALTYD---AVQLFAQTLKNLPFKPMPQNCSQR---TESVRDDGSSFKNYMRTLR 354

  Fly   132 LLTSQPERPIMTKIFTYF---MQERYNINVVILVPRLHGVQAFNV----RPYTPTSCSSLEP--V 187
            |.......||      ||   :::.|:::|:.|.|  .|:.....    |.|.|   ..|.|  .
  Fly   355 LTDRLLTGPI------YFEGNVRKGYHLDVIELQP--SGIVKVGTWDEDRQYRP---QRLAPTTA 408

  Fly   188 EIDIKDGDLWDVFPRRLKNLHGCPLSVIVWDIP--PYMRI--NWKSSDPMDGLDGLDGLLLRIVA 248
            :.|..|..|.:            ...:|:..:|  ||.::  .:|..:.....:|....|::.:|
  Fly   409 QFDSVDNSLAN------------KTFIILLSVPNKPYAQLVETYKQLEGNSQYEGYGVDLIKELA 461

  Fly   249 RKMNFTLKLIPNEPNGLIGGSSFMNGTFTGAYK--------MLRE---RRANITIGCAACTPERS 302
            .|:.|....:.       ||:.:      |:|.        ||||   .||::.|.....|.||.
  Fly   462 DKLGFNFTFVN-------GGNDY------GSYNKSTNESTGMLREIMTGRADLAITDLTITSERE 513

  Fly   303 TFLEATSPYSQMSYIIVLQARGGYSIYEVMLF--PF-EKYTWLLLSTILGL---HWIVG----SR 357
            ..|:.|.|:..:. |.:|..:...:..|:..|  || |:..|.|..:.||:   .:|:|    |.
  Fly   514 QALDFTIPFMNLG-IAILYLKPQKATPELFTFMDPFSEEVWWFLGFSFLGVSLSFFILGRLSPSE 577

  Fly   358 WRMPSPIL-----------AGWMLWIFVIRASYEASVFNFIQNSPVKP---SPRTLDQALSGGFR 408
            |..|.|.:           .|..:| |...|..:       |.|.:.|   |.||:  |....|.
  Fly   578 WDNPYPCIEEPEELENQFTLGNSIW-FTTGALLQ-------QGSEIGPKALSTRTV--ASFWWFF 632

  Fly   409 FITDHASYRMTLKIPSF----QGKTLI-SAGQPVDVFDALLKAPWKTGAFTSRAFLADHLVRHRK 468
            .:...:||  |..:.:|    :.::|| |.....|..|.::....|||: |...|:.....|::|
  Fly   633 TLIVVSSY--TANLAAFLTIEKPQSLINSVDDLADNKDGVVYGAKKTGS-TRNFFMTSAEERYKK 694

  Fly   469 HRNQLV-----ILAEKIVDNM-------------------------------------------- 484
             .|:.:     .|.|   |||                                            
  Fly   695 -MNKFMSENPQYLTE---DNMEGVNRVKTNTHYAFLMESTSIEYNTKRECNLKKIGDALDEKGYG 755

  Fly   485 LCMY--FPHGSYFAWEINKLLFNMRSFGIFQHHSQILAWDNLPT---TTDTDTPGKRIHSSTESV 544
            :.|.  :||...|    |..|..::..|:.:.... ..|:.:.|   .|..|.|      ....:
  Fly   756 IAMRKDWPHRGKF----NNALLELQEQGVLEKMKN-KWWNEVGTGICATKEDAP------DATPL 809

  Fly   545 ATGFAESMSFVVAALNCLMGALCISIVVFGLELLSRRRHW 584
            .....|.:.||:...:|.  ||...|:.:.|.::.:..|:
  Fly   810 DMNNLEGVFFVLLVGSCC--ALLYGIISWVLFVMKKAHHY 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
GluRIIENP_001036733.1 PBP1_iGluR_Kainate 42..396 CDD:107377 37/178 (21%)
ANF_receptor 51..382 CDD:279440 34/162 (21%)
PBP2_iGluR_Kainate 419..790 CDD:270432 85/418 (20%)
Lig_chan 551..824 CDD:278489 59/300 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462860
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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