DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and GRIK5

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:446 Identity:91/446 - (20%)
Similarity:159/446 - (35%) Gaps:122/446 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PYM--RINWKSSDPMDGLDGLDGLLLRIVARKMNFTLKLIPNEPNGLIGGSSFMNGTFTGAY-KM 282
            ||:  |.|:::....:..:|....:||.:|..:.|..:|...| :||.|... .||::||.. ::
Human   426 PYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVE-DGLYGAPE-PNGSWTGMVGEL 488

  Fly   283 LRERRANITIGCAACTPERSTFLEATSPYSQMS----YIIVLQARGGYSIYEVMLFPFEKYTWLL 343
            :..::|::.:.....|.||...::.:.|:..:.    |.:.:..:.||..:   |.||....||.
Human   489 INRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSF---LDPFSPAVWLF 550

  Fly   344 L-------STILGLHWIVGSR-----WRMPSPILAG----------------------------- 367
            :       |.:|    .:.:|     |..|.|.|..                             
Human   551 MLLAYLAVSCVL----FLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEI 611

  Fly   368 -------------WMLWIFVIRASYEASVFNFI----QNSPVKPSPRTLDQALSGGFRFITDHAS 415
                         |..:..:|.:||.|::..|:    ...||:.:....||.   ...:.|.||.
Human   612 MPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQT---NIEYGTIHAG 673

  Fly   416 YRMTLKIPSFQGK---------TLISAGQPVDVFDALLKAPWK--TGAFTSR-AFLADHLVR--H 466
            ..||.    ||..         ..:.:.|| .||   :|:..:  .....|| |||.:..:.  |
Human   674 STMTF----FQNSRYQTYQRMWNYMQSKQP-SVF---VKSTEEGIARVLNSRYAFLLESTMNEYH 730

  Fly   467 RKHRNQLVILAEKIVDNMLCMYFPHGSYFAWEINKLLFNMRSFGIFQHHSQILA---WDNLPTTT 528
            |:....|..:...:......:..|.||.|..||...:..::.    .:..:||.   |:      
Human   731 RRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQE----NNRLEILKRKWWE------ 785

  Fly   529 DTDTPGKRIHSSTESVATGFA-ESMSFVVAALNCLMGALCISIVVFGLELL-SRRR 582
                 |.|.....:..|.|.. |::..:...|.|   .|.|::.|..:|.: |.||
Human   786 -----GGRCPKEEDHRAKGLGMENIGGIFIVLIC---GLIIAVFVAVMEFIWSTRR 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389
ANF_receptor 42..379 CDD:279440
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 76/382 (20%)
Lig_chan 546..816 CDD:278489 55/302 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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