DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and GRIK4

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001269399.1 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:443 Identity:85/443 - (19%)
Similarity:150/443 - (33%) Gaps:116/443 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PYMRINWKSSDPMDGLDGLDGL---LLRIVARKMNFTLKLIPNEPNGLIG----GSSFMNGTFTG 278
            ||:.:.....: |:|.|..:|.   :|:.:|..:.|..|:      .|:|    |....|||:||
Human   427 PYLMLKGNHQE-MEGNDRYEGFCVDMLKELAEILRFNYKI------RLVGDGVYGVPEANGTWTG 484

  Fly   279 AYKMLRERRANITIGCAACTPERSTFLEATSPYSQMS----YIIVLQARGGYSIYEVMLFPFEKY 339
            ....|..|:|::.:.....|.||...::.:.|:..:.    |.:.:..:.||..:   |.||...
Human   485 MVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSF---LDPFSPG 546

  Fly   340 TWLLL-------STILGL-HWIVGSRWRMPSPILAG----------------------------- 367
            .||.:       |.:|.| ..:....|..|.|...|                             
Human   547 VWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTI 611

  Fly   368 -------------WMLWIFVIRASYEASVFNFI----QNSPVKPSPRTLDQALSGGFRFITDHAS 415
                         |..:..:|.:||.|::..|:    .:.|::......||.   ...:.|.|..
Human   612 APRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQT---AIEYGTIHGG 673

  Fly   416 YRMTLKIPSFQGK---------TLISAGQPVDVFDALLKAPWKTGAFTSRAFLADHLVR--HRKH 469
            ..||.    ||..         ..:.:.|| .||....:........::.|||.:..:.  :|:.
Human   674 SSMTF----FQNSRYQTYQRMWNYMYSKQP-SVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQR 733

  Fly   470 RNQLVILAEKIVDNMLCMYFPHGSYFAWEINKLLFNMRSFGIFQHHSQILA---WDNLPTTTDTD 531
            ...|..:...:......:..|.||.|..|.:..:..::.    .:..:||.   |:         
Human   734 NCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQE----NNRLEILKRKWWE--------- 785

  Fly   532 TPGKRIHSSTESVATGFA-ESMSFVVAALNCLMGALCISIVVFGLELLSRRRH 583
              |.:.....:..|.|.. |::..:...|.|   .|.::|.:..||.|...||
Human   786 --GGKCPKEEDHRAKGLGMENIGGIFVVLIC---GLIVAIFMAMLEFLWTLRH 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
GRIK4NP_001269399.1 PBP1_iGluR_Kainate_KA1_2 26..400 CDD:107389
ANF_receptor 43..382 CDD:279440
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 71/379 (19%)
Lig_chan 547..816 CDD:278489 47/294 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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