DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and glr-7

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001337310.1 Gene:glr-7 / 180547 WormBaseID:WBGene00001618 Length:885 Species:Caenorhabditis elegans


Alignment Length:447 Identity:91/447 - (20%)
Similarity:164/447 - (36%) Gaps:115/447 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 RLHGVQAFN--VRPYTPTSCSSL--EPVEIDIKDGDLWDVFPRRLKNLHGCPLSVIVWDIPPYMR 224
            |.|....||  |..::|.|..|:  ..:::|:::.:::               .|:....||:::
 Worm   337 RDHEDALFNKEVGVWSPISKLSVMYGTLQVDVRNLNIF---------------RVVTLIQPPFVQ 386

  Fly   225 INWKSSDPMDGLDGLDGLLLRIVARKMNFTLKLIPNEPNGLIGGSSFMNGTFTGAYKMLRERRAN 289
               ::.||....:|....|:.::..::|||..:...|....  |:...||.:.|....|....|:
 Worm   387 ---RTGDPDTPYEGYCIDLINMIQVEVNFTYTIYEVEDGSF--GTMDDNGNWNGLIGALVSGSAD 446

  Fly   290 ITIGCAACTPERSTFLEATSPYSQM--SYIIVLQARGGYSIYEVMLFPFEKYTWLLLSTILGLHW 352
            |.:...:...||...::.|.||..:  :.|::.:|...||:::.|.. .|...||.:        
 Worm   447 IALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSLFKFMKV-LEWPVWLCI-------- 502

  Fly   353 IVGSRWRMPSPILAGWMLWIFVIRASYEASVFNFIQN-----SPVKPSPRTLDQALSGGFRFITD 412
                   :.:.:....:||||     ...|.::|..|     :.::....:|.:.|         
 Worm   503 -------VAAYLFTSILLWIF-----DRFSPYSFTNNKERYQNDIEKRQFSLKECL--------- 546

  Fly   413 HASYRMTLKIPSFQGKTLISAGQPVDVFDALLKAPWKTGAF----TSRAFLADHLVRHRKHRNQL 473
              .:.||...|...|:.      |.::...|:.|.|....|    :..|.||..|...|  ..|.
 Worm   547 --WFCMTSLTPQGGGEA------PKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSR--LEQP 601

  Fly   474 VILAEKIVDNMLCMYFP-HGS----YF--AWEINKLLFNM-RSFGIFQHHS-----QILAWD--- 522
            :...:.:.......|.| .||    ||  ..||.:..:|| :...:.:..|     ::..||   
 Worm   602 ISSLDDLAKQYKIEYAPIKGSASETYFRRMAEIEETFYNMWKEMSLNESMSPRDRAKLAVWDYPV 666

  Fly   523 --------------NLPTTTDTDTPGKRIHSSTESVATGFA---ESMSFVVAAL-NC 561
                          .||...||..  .|:.:|.:    |||   ::.....||| ||
 Worm   667 SDKFTNMWRYMQESKLPVNMDTAV--DRVLNSVD----GFAFIGDATEIKYAALTNC 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
glr-7NP_001337310.1 Periplasmic_Binding_Protein_Type_1 <102..>220 CDD:324556
PBP2_iGluR_putative 373..767 CDD:270435 82/411 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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