DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and glr-5

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_505244.1 Gene:glr-5 / 179251 WormBaseID:WBGene00001616 Length:932 Species:Caenorhabditis elegans


Alignment Length:457 Identity:83/457 - (18%)
Similarity:150/457 - (32%) Gaps:126/457 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PYMRINWKSSDPMDGLDGLDGL---LLRIVARKMNFTLKLIPNEPNGLIGGSSFMNGTFTGAYKM 282
            ||:.:. |:...:|.....:|.   ||..:::.:.||. .|....:|..|...:.||::.|....
 Worm   448 PYVMLK-KNHYELDANSKFEGFCIDLLAELSKDLGFTY-TIHAVKDGKYGNDKYGNGSWDGMMGE 510

  Fly   283 LRERRANITIGCAACTPERSTFLEATSPYSQMSYIIVLQARGGYSIYEV----------MLFPFE 337
            :....|.:.:........||..::.|.|:..:...|         :|:|          .|.|..
 Worm   511 ILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGISI---------LYKVPDDQQPDLFSFLNPLS 566

  Fly   338 KYTWLLLST-----ILGLHWIVG---SRWRM---------PSPILAGWMLWIFVIRASYEASVFN 385
            ...|..::|     .||::::..   ..|.:         |.|                 |:.|.
 Worm   567 WQIWTAIATSIITVTLGMYFVANVTPYEWNLNFSCCTAHEPHP-----------------AAAFA 614

  Fly   386 FIQNSPVKPS------------------------PRTLDQALSGGFRFI---------TDHASYR 417
            ..|.:|:..|                        ||.:...|.||..::         |.:.:..
 Worm   615 TNQEAPIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRLLGGTWWVFYLVIISAYTANLAAV 679

  Fly   418 MTLKIPSFQGKTLISAGQPVDVFDALLKAPWKTGAFTSRAFLADH--LVRHRKHRNQLVILAEKI 480
            :|:..|....|.|........:....::. ..|..|...:.:|.|  :.::.|.::..|....|.
 Worm   680 LTVSRPYIPIKNLDDLANQTTISYGTIRG-GSTMQFFQESRIAAHVKMWQYMKDKDVFVTSNGKG 743

  Fly   481 VDNMLCM---YFPHGSYFAWEINKL--------LFNMRSFGIF---------QHHSQILAWD--- 522
            |:..|.|   |....:...:|..:.        :...:.:||.         :...|||.:.   
 Worm   744 VERALSMNYAYLMESTSLEYETQQNCNLTQIGGVLGSKGYGIALAKKSEWTDRISRQILLYAKRG 808

  Fly   523 --NLPTTTDTDTPGKRIHSSTESVA-TGFAESMSFVVAALNCLMG---ALCISIVVFGLELLSRR 581
              .:..|....:.|....|:..:|. ..||.|| :.||.|...:|   .|...:|:|  ||:.|.
 Worm   809 IIEMKKTKWWRSKGAACASTASAVKHDRFALSM-YNVAGLFITLGVGIVLAAIVVIF--ELIHRC 870

  Fly   582 RH 583
            .|
 Worm   871 HH 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
glr-5NP_505244.1 PBP1_iGluR_delta_like 26..418 CDD:107376
ANF_receptor 38..377 CDD:279440
PBP2_iGluR_Kainate 438..819 CDD:270432 65/399 (16%)
Lig_chan 568..855 CDD:278489 51/305 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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