DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and gria2a

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:XP_005170953.1 Gene:gria2a / 170450 ZFINID:ZDB-GENE-020125-3 Length:893 Species:Danio rerio


Alignment Length:579 Identity:99/579 - (17%)
Similarity:178/579 - (30%) Gaps:183/579 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 IMTKIFTYFMQERYNIN---------VVILVPRLHGVQAFNVRPYTPTSCSSLEPVEIDIKDGDL 196
            :||:.|.:..::|.:|:         ....||...||:...          :|:.|.:|...|::
Zfish   300 VMTEAFRFLHKQRIDISRRGNNGDCLANPAVPWAQGVEIER----------ALKQVRVDGLTGNI 354

  Fly   197 -WDVFPRR---------LKNLHGCPLSVIVWDIPPYMRINWKSSDPMD--GLDGLDGLLLRI--- 246
             :|.:.||         |||  ..|:.:..|:....|.:......|.|  |::....::..|   
Zfish   355 QFDQYGRRVNYTVNVMELKN--SGPVKIGYWNEMDKMAVTKSDLFPNDTMGMENKTVIVTTILEA 417

  Fly   247 --VARKMN----------------------------FTLKLIPNEPNGLIGGSSFMNGTFTGAYK 281
              |..|.|                            :.|:::   .:|..|........:.|...
Zfish   418 PYVMLKKNAELFTDNERYEGYCVDLAAEIAKHCGFKYQLRIV---ADGKYGARDAETKIWNGMVG 479

  Fly   282 MLRERRANITIGCAACTPERSTFLEATSPYSQMSYIIVL----QARGG---------YSIYEVML 333
            .|...:|:|.:.....|..|...::.:.|:..:...|::    :::.|         |.|:..::
Zfish   480 ELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIV 544

  Fly   334 FP-------------FEKYTW---------LLLSTILGLHWIVGSRW---------------RMP 361
            |.             |..|.|         |..|.......|..|.|               |..
Zfish   545 FAYIGVSVVLFLVSRFSPYEWHTEEFEDGQLGPSESTNEFGIFNSLWFSLGAFMQQGCDISPRSL 609

  Fly   362 SPILAGWMLWIF--VIRASYEASVFNFIQ-NSPVKPSPRTLDQALSGGFRFITDHASYRMTLKIP 423
            |..:.|.:.|.|  :|.:||.|::..|:. ...|.|.....|.|......:.|            
Zfish   610 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGT------------ 662

  Fly   424 SFQGKTLISAGQPVDVFD----ALLKAPW------KTGAFTSRAFLADHLVRHRKHRNQLVILAE 478
                   :.||...:.|.    ||....|      :...|....  .:.::|.||.:.:...|.|
Zfish   663 -------LDAGSTKEFFRRSKIALFDKMWQYMKSAEPSVFVKNT--VEGVLRVRKSKGKYAYLLE 718

  Fly   479 KIVDNML-----C---------------MYFPHGSYFAWEINKLLFNMRSFGIFQHHSQILAWDN 523
            ..::..:     |               :..|.||.....:|..:..:...|:.........:|.
Zfish   719 STMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDK 783

  Fly   524 LPTTTDTDTPGKRIHSSTESVATGFAESMSFVVAALNCLMGALCISIVVFGLELLSRRR 582
                      |:......||.....|.|:|.|......|:|.|.::::|..:|...:.|
Zfish   784 ----------GECGSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSR 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
gria2aXP_005170953.1 Periplasmic_Binding_Protein_Type_1 23..391 CDD:299141 22/102 (22%)
ANF_receptor 51..373 CDD:279440 16/82 (20%)
PBP2_iGluR_AMPA 406..783 CDD:270433 60/400 (15%)
Lig_chan 538..816 CDD:278489 53/308 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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