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Protein Alignment Ir7d and Gria1

DIOPT Version :9

Sequence 1:	NP_001138175.1	Gene:	Ir7d / 7354416	FlyBaseID:	FBgn0259190	Length:	594	Species:	Drosophila melanogaster
Sequence 2:	NP_001106796.1	Gene:	Gria1 / 14799	MGIID:	95808	Length:	907	Species:	Mus musculus

Alignment Length:	448	Identity:	79/448 - (17%)
Similarity:	155/448 - (34%)	Gaps:	118/448 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   221 PYMRINWKSSDPMDGLDGLDGLLLRI---VARKMNFTLKL-IPNEPNGLIGGSSFMNGTFTGAYK 281
            ||:.:. |:::..:|.|..:|..:.:   :|:.:.::.:| |.::  |..|........:.|...
Mouse   418 PYVMLK-KNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSD--GKYGARDPDTKAWNGMVG 479

  Fly   282 MLRERRANITIGCAACTPERSTFLEATSPYSQMSYIIVL----QARGG---------YSIYEVML 333
            .|...||::.:.....|..|...::.:.|:..:...|::    :::.|         |.|:..::
Mouse   480 ELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIV 544

  Fly   334 FPF--EKYTWLLLSTILGLHW---------------------IVGSRW---------------RM 360
            |.:  ......|:|......|                     |..|.|               |.
Mouse   545 FAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 609

  Fly   361 PSPILAGWMLWIF--VIRASYEASVFNFIQ-NSPVKPSPRTLDQALSGGFRFITDHAS-----YR 417
            .|..:.|.:.|.|  :|.:||.|::..|:. ...|.|.....|.|......:.|..|.     :|
Mouse   610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFR 674

  Fly   418 MTLKIPSFQGK-TLISAGQPVDVFDALLKAPWKTGAFTSRAFLADHLVRHRKHRNQLVILAEKIV 481
            .: ||..|:.. |.:.:.:| .||....:               :.::|.||.:.:...|.|..:
Mouse   675 RS-KIAVFEKMWTYMKSAEP-SVFVRTTE---------------EGMIRVRKSKGKYAYLLESTM 722

  Fly   482 DNML-----C---------------MYFPHGSYFAWEINKLLFNMRSFGIFQHHSQILAWDNLPT 526
            :..:     |               :..|.||.....:|..:..:...|:.         |.|.:
Mouse   723 NEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVL---------DKLKS 778

  Fly   527 T--TDTDTPGKRIHSSTESVATGFAESMSFVVAALNCLMGALCISIVVFGLELLSRRR 582
            .  .|....|.:...|.:..:   |.|:|.|......|:|.|.::::|..:|...:.|
Mouse   779 KWWYDKGECGSKDSGSKDKTS---ALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSR 833

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.