DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and grid2

DIOPT Version :9

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:XP_031759030.1 Gene:grid2 / 100487676 XenbaseID:XB-GENE-955038 Length:1007 Species:Xenopus tropicalis


Alignment Length:463 Identity:92/463 - (19%)
Similarity:168/463 - (36%) Gaps:138/463 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 DGDLWDVFPRRLK-NLHGCPLSVIVWDIPPYMRINWK-----------SSDPMDGLDGLDGLLLR 245
            :|.|.|   |:|: |:.|..|.|......|::.::..           |.|.:|.|....|....
 Frog   426 NGSLTD---RKLENNMRGVVLRVATVLEEPFVMVSENVLGKPKKYQGFSIDVLDALSSYLGFKYE 487

  Fly   246 I-VARKMNFTLKLIPNEPNGLIGGSSFMNGTFTGAYKMLRERRANITIGCAACTPERSTFLEATS 309
            | ||....:              ||...:|::.|....|..:||::.|.....||:|...::.|:
 Frog   488 IYVASDHKY--------------GSPQADGSWNGLIGELLLKRADMGISALTITPDRENVVDFTT 538

  Fly   310 PYSQMSYIIVLQARGGYSIYEVM--LFPFEKYTWLLLS-TIL--G-----LHWIVGSRWRMPS-- 362
            .|  |.|.:.:..|......::.  |.||:...|..:: |:|  |     |:|:...|.:|.|  
 Frog   539 RY--MDYSVGVLLRKAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMT 601

  Fly   363 ------------------------------PILAGWMLWIFVIRASYEASVFNFIQNSPVKPSPR 397
                                          .::..|.|:..::.:||.|::..|:..|.::.|.:
 Frog   602 STTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTISRIESSIQ 666

  Fly   398 TLDQALSG----GFRFITDHASYRMTLKIPSFQGKTLISAGQPVDVFDALLKAPWKTGAFTSRAF 458
            :| |.||.    .:..:.|.|.|.          ...:....|.: .|::....|:   ..:|:.
 Frog   667 SL-QDLSRQTDIPYGTVFDSAVYE----------HVRVKGMNPFE-RDSMYSQMWR---MINRSN 716

  Fly   459 LADHLVRHR-------KHRN-----QLVILAEKIVDNMLCMYFPHGSYFAWEINKLLFNMRSFGI 511
            .:::.|:..       ||.|     ...:|....:::..|.::..|:..|         .|.:||
 Frog   717 GSENNVQESLEGIQKVKHGNYAFVWDAAVLEYIAINDQDCSFYTVGNTIA---------DRGYGI 772

  Fly   512 -FQHHS--------QILAWDNLPTTTDTDTPGKR---------IHSSTESVATGFA-ESMSFVVA 557
             .||.|        :||   .|....|.|....:         :|||.::...|.: :..||  :
 Frog   773 ALQHGSPYRDIFSQRIL---ELQQNGDMDILKHKWWPRNGQCELHSSMDTKQKGSSLDIKSF--S 832

  Fly   558 ALNCLMGA 565
            .:.|::.|
 Frog   833 GVFCILAA 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
grid2XP_031759030.1 Periplasmic_Binding_Protein_type1 28..429 CDD:415822 1/2 (50%)
PBP2_iGluR_delta_2 440..806 CDD:270449 78/408 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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