DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7d and grik6

DIOPT Version :10

Sequence 1:NP_001138175.1 Gene:Ir7d / 7354416 FlyBaseID:FBgn0259190 Length:594 Species:Drosophila melanogaster
Sequence 2:XP_021335521.1 Gene:grik6 / 100151589 ZFINID:ZDB-GENE-130530-729 Length:465 Species:Danio rerio


Alignment Length:199 Identity:41/199 - (20%)
Similarity:67/199 - (33%) Gaps:60/199 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 LDGLDGLLLRIVARKMNFTLKLIPNEPNGLIGGSSF----MNGTFTGAYKMLRERRANITIGCAA 296
            |:|....||..:|:|:.|..|:      .|:...|:    .||.:.|....:....|::.:....
Zfish    49 LEGYCMDLLTELAKKLGFKYKV------HLVKDGSYGRQDENGNWNGMIGEVVRGEADLAVAPLT 107

  Fly   297 CTPERSTFLEATSPYSQMSYIIVLQ-----ARGGYSIYEVMLFPFEKYTW--LLLS--------- 345
            .|..|...:..|.||.|....|:|:     ...|:..:   |.||...||  :|::         
Zfish   108 LTAAREKAVGMTKPYMQTGISILLRKDIVSEEAGFFDF---LSPFSGETWFGILIAYFVTAVCIC 169

  Fly   346 --------------------TILGLHWIVGSRWRM----PSP-------ILAGWMLWIFVIRASY 379
                                |:|...|.......:    |.|       |...|.|:..|:.|.|
Zfish   170 IVGRLSPCEWSQPETEPNHFTLLHSLWYTAGALSLQGAGPHPKAVSGRVISCTWWLFAVVLLACY 234

  Fly   380 EASV 383
            .:|:
Zfish   235 FSSL 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7dNP_001138175.1 None
grik6XP_021335521.1 PBP2_iGluR_non_NMDA_like 28..381 CDD:270403 41/199 (21%)

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