DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94d and grik5

DIOPT Version :10

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001315085.1 Gene:grik5 / 798791 ZFINID:ZDB-GENE-070821-6 Length:1067 Species:Danio rerio


Alignment Length:468 Identity:84/468 - (17%)
Similarity:157/468 - (33%) Gaps:99/468 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 IERRLDNSTVIFEKRLENLHGYEVPIALGGSSPRLIVYRDLEGKLIFSGPVGNFMKSFEQ----R 220
            :...|.|.::|....|||      |..:     |.|.|::.||...:.|...:.::....    .
Zfish   421 VSETLANKSLIITTILEN------PYVM-----RKINYQEFEGNEQYEGFCVDMLRELSDILKFT 474

  Fly   221 YNCRLVQ------PYPFDESAISPARDLIASVQNGSVQIALGAI---YPQVPYTGYSYPIELMSW 276
            |..:||.      |.| :.|......:||    |....:|:.|.   ..:.....:|.|...:..
Zfish   475 YRIKLVDDGLYGAPEP-NGSWTGMVGELI----NRKADLAVAAFTITSEREKVIDFSKPFMTLGI 534

  Fly   277 CLMMPVP-EEVPHSQLYSMVFSPMAFGITIVAMVLISLTLSMALRLHGYRVSFSEYFLHDSCLR- 339
            .::..|. ...|....:...|||..:...::|.:.:|..|.::.||..|     |::....||| 
Zfish   535 SILYRVHIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLSARLSPY-----EWYNPHPCLRE 594

  Fly   340 -------------------GVLSQSFYEVLRAPALIKAMYLVICLLG------LLITSWYNSYFS 379
                               |...|...|::  |..:...    |:.|      |:|.|.|.:..:
Zfish   595 RRDLLENQYTLGNSLWFPVGGFMQQGSEIM--PRALSTR----CVSGVWWAFTLIIISSYTANLA 653

  Fly   380 TFVTSAPRFPQLTSYESIR-HSNIKIVIWKPEYEMLLFFSENMEKYSSIFQLQEDYKEFLHLRDS 443
            .|:|.......:.|.:.:. .:||:.........|..|.:...:.|..::......:..:.::.:
Zfish   654 AFLTVQRMEVPIESPDDLADQTNIQYGTIHGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKST 718

  Fly   444 -------FDTRYGYMMPMEKWSLMKEQQRVFSSPLFSLQDDLCVFHTVPIVFPMVKNSIFKEPFD 501
                   .:::|.:::.    |.|.|..|..:..|..:..   :..|......|...|.|::...
Zfish   719 EEGIARVVNSKYAFLLE----STMNEYHRSLNCNLTQIGG---LLDTKGYGIGMPLGSPFRDELS 776

  Fly   502 RLILDVTATGLLS----RWRDMSFTEMIKAGQLGLEDRGHPKEFRAMKVGDLIQIWRFVGWMLGL 562
            ..:|.:.....|.    ||.:        .|:...|:....|......:|.:     ||..:.||
Zfish   777 LAVLQLQENNRLEILKRRWWE--------GGKCPKEEDHRAKGLGMENIGGI-----FVVLICGL 828

  Fly   563 ATIVFLLELICFW 575
            ...||:..:...|
Zfish   829 IIAVFVAVMEFVW 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94dNP_001138099.1 None
grik5NP_001315085.1 PBP1_iGluR_Kainate_KA1_2 36..414 CDD:380616
Periplasmic_Binding_Protein_Type_2 427..797 CDD:473866 72/403 (18%)
Blue background indicates that the domain is not in the aligned region.

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