DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94d and grik1a

DIOPT Version :9

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:615 Identity:116/615 - (18%)
Similarity:213/615 - (34%) Gaps:124/615 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DSFYHSLIH--HLNREL---KIEYVLLLGNFDTT---WLDILW----------QLPVSVLQIKEH 65
            ||:..|:|.  .:.|:|   |.|..|:.|...|.   ..|.::          |:.||.||...|
Zfish   289 DSYVASVIQKWSMERQLAPPKPESGLMSGIMTTAAALMYDAVFMVAVASQRATQMTVSSLQCHRH 353

  Fly    66 SRETY-----SLLENPSHNVLTIAFVNDSPEDILEILYRNLRMLNTQPVLLVIRKSTIRVNSLLE 125
            ....|     :|.:....:.||...|.:..:.:.:....:|..|........:.....|.|.|  
Zfish   354 KPWRYGPRFMNLFKEAQWDGLTGRIVLNKTDGLRKEFNLDLISLKEDGTAKRVADGASRPNKL-- 416

  Fly   126 W----CWHHQLLKVVAIAQDFMESLIVYSYNPFPVLQFIERR-----LDNSTVIFEKRLENLHGY 181
            |    .|:                    ||....:.:..:.:     |.|.|:|....|||    
Zfish   417 WTKIGVWN--------------------SYTGLNLTEIKDNKNITDSLANRTLIVTTILEN---- 457

  Fly   182 EVPIALGGSSPRLIVYRDLEGKLIFSGPVGNFMKSFEQ----RYNCRLVQPYPF----DESAIS- 237
              |..:...|.:::...|.     |.|...:.:|....    .|..:||....:    |:...: 
Zfish   458 --PYVMYKKSDKVLYGNDR-----FEGYCLDLLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNG 515

  Fly   238 PARDLIASVQNGSVQIALGAIYPQVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMV--FSPMA 300
            ..|:||..:.:.:| ..|...|.:.....:|.|...:...::...|... :..::|.:  .:|..
Zfish   516 MVRELIDHIADLAV-APLTITYVREKVIDFSKPFMTLGISILYRKPNGT-NPGVFSFLNPLTPDI 578

  Fly   301 FGITIVAMVLISLTLSMALRLHGY------------RVSFSEYFLHDSCLRGVLSQSFYEVLRAP 353
            :...::|.:.:|..|.:..|...|            .|..:.:.|.:|...||.:     ::|..
Zfish   579 WMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAA-----LMRQG 638

  Fly   354 ALIKAMYLVICLLG-------LLITSWYNSYFSTFVTSAPRFPQLTSYESI-RHSNIKIVIWKPE 410
            :.:....|...:||       |:|.|.|.:..:.|:|.......:.|.:.: :.:.|:....:..
Zfish   639 SELMPKALSTRILGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRDG 703

  Fly   411 YEMLLFFSENMEKYSSIFQLQEDYKEFLHLRDSFD--TRY---GYMMPMEKWSLMKEQQRVFS-S 469
            ..|..|....:..|..::......|....:::|.|  ||.   .|.:.||..|:....||..: :
Zfish   704 STMTFFKKSKISTYEKMWAFMSSRKNTALVKNSKDGITRVLTTDYALLMESTSIEYITQRNCNLT 768

  Fly   470 PLFSLQDDLCVFHTVPIVFPMVKNSIFKEPFDRLILDVTATGLLSR-----WRDMSFTE--MIKA 527
            .:..|.|........||..|      :::.....||.:...|.|..     ||.....|  ..:|
Zfish   769 QVGGLIDSKGYGVGTPIGSP------YRDKVTIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEA 827

  Fly   528 GQLGLEDRGHPKEFRAMKVGDLIQIWRFVG 557
            ..||:|:.|  ..|..:..|.::.::..:|
Zfish   828 SALGVENIG--GIFIVLAAGLVLSVFVAIG 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94dNP_001138099.1 None
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141 32/164 (20%)
ANF_receptor 57..398 CDD:279440 24/108 (22%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 72/392 (18%)
Lig_chan 577..846 CDD:278489 54/281 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591608
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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