DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94d and GluRIID

DIOPT Version :9

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster


Alignment Length:677 Identity:119/677 - (17%)
Similarity:237/677 - (35%) Gaps:188/677 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 EYVLLLGNFDTTWLDILWQLPVSVLQIKEHSRETYSLLENPSHNVLTIAFVNDSPE---DILEIL 97
            :|..::||.:....|:                |.|...|   .|:..|...:...|   |::|.|
  Fly   238 DYTYIIGNLNLHTFDL----------------EEYKYSE---ANITGIRMFSPDQEEVRDLMEKL 283

  Fly    98 YRNLRMLNTQPVLLVIRKSTIRVNS-----LLEWCWHHQLLKVVAIAQDFMESLIVYSYNPFPVL 157
            ::.|.  .::|           |||     .:|....:..::|:|      |:.....|.| .:|
  Fly   284 HQELG--ESEP-----------VNSGSTFITMEMALTYDAVRVIA------ETTKHLPYQP-QML 328

  Fly   158 QFIER----RLDNST------------------VIFEKRLENLHGYEVPIALGGSS--------- 191
            ...||    :.|.||                  :.||..:.....::| |.|..|.         
  Fly   329 NCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNVRKGFTFDV-IELQTSGLVKVGTWEE 392

  Fly   192 ---------PRLIVYRDL-EGKL----------IFSGPVGNFMKSFE--------QRYNCRLVQ- 227
                     |:.:.:.|: :|.|          :.:.|..:.::|.:        |.|...|:: 
  Fly   393 GKDFEFQRPPQAVNFNDIDDGSLVNKTFIVLISVATKPYASLVESIDTLIGNNQFQGYGVDLIKE 457

  Fly   228 ----------------PYPFDESAISPARDLIASVQNGSVQIA---LGAIYPQVPYTGYSYPIEL 273
                            .|.......:....::..:..|...:|   |.....:.....:|.|...
  Fly   458 LADKLGFNFTFRDGGNDYGSFNKTTNSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMN 522

  Fly   274 MSWCLMMPVPEEVPHSQLYSMV--FSPMAFGITIVAMVLISLTLSMALRL--------------- 321
            :...::...|::.|.: |:|.:  ||...:....:|.:.:||...:..||               
  Fly   523 LGIAILYVKPQKAPPA-LFSFMDPFSSEVWLYLGIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEP 586

  Fly   322 ----HGYRVSFSEYFLHDSCLRGVLSQSFYEVLRAPALIKAMYLVICLLGLLITSWYNSYFSTFV 382
                :.:.::.|.:|     ..|.|.|...|:.......:.:..:.....|::.|.|.:..:.|:
  Fly   587 EELENQFTINNSLWF-----TTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFL 646

  Fly   383 TSAPRFPQLTSYESIRHSNIKIVIWKPEY------EMLLFFSENMEK-YSSIFQLQEDYKEFL-- 438
            |.......:.|.:.:..:...:     :|      ....|||.:.|. |..:.:....:.|.|  
  Fly   647 TIENPTSPINSVKDLADNKDDV-----QYGAKRTGSTRNFFSTSEEPIYIKMNEYLNAHPEMLME 706

  Fly   439 HLRDSFD-----TRYGYMMPMEKWSLMKEQQRVFSSPLFSLQDDLCVFHTVPIVFPMVKNSIFKE 498
            :.:...|     |:|.::  ||..|:  |...|....|..:.|.|   ........||||..:::
  Fly   707 NNQQGVDKVKSGTKYAFL--MESTSI--EFNTVRECNLTKVGDPL---DEKGYGIAMVKNWPYRD 764

  Fly   499 PFDRLILDVTATGLLSRWRDMSFTEMIKAGQLGLE-DRGHPKEFRAMKVGDLIQIWRFVGWMLG- 561
            .|::.:|::...|:|:|.::..:.| :.||....: |...|.|   :.|.:|..|  :|..::| 
  Fly   765 KFNKALLELQEQGVLARLKNKWWNE-VGAGVCSAKSDDDGPSE---LGVDNLSGI--YVVLVIGS 823

  Fly   562 LATIVFLLELICFWRHKMWQNMKYMFC 588
            :.:|:..:...|::.:|..:|.:..||
  Fly   824 IISIIISILCWCYFVYKKAKNYEVPFC 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94dNP_001138099.1 None
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 36/198 (18%)
ANF_receptor 46..380 CDD:279440 34/181 (19%)
PBP2_iGluR_Kainate 417..788 CDD:270432 62/388 (16%)
Lig_chan 549..819 CDD:278489 55/292 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462870
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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