DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94d and CG11155

DIOPT Version :9

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:678 Identity:122/678 - (17%)
Similarity:234/678 - (34%) Gaps:209/678 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LQIKEH---------SRETYSL--LENPSHNVLTIAFVNDSPEDILEIL-------YRNLRMLNT 106
            ||:.:|         ..|||.|  ....|.|:.....|:...:..||::       :..|..:|.
  Fly   243 LQMNDHRYHYMFTTFDLETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTING 307

  Fly   107 QPVLLVIRKSTIRVNSLLEWC--------WHHQ--LLKVVAIAQDFMESLIVYSYNPF------- 154
            .|.:..  :|.:..:|:..:.        .:||  .:|.::...|...:..:..||..       
  Fly   308 SPYIQT--ESALMFDSVYAFANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDG 370

  Fly   155 --PVLQFIERR-----------------------------LDNSTVIFEKRLENLHGYEVPIALG 188
              ..:||:|.|                             :.:.|..::..:.|:   .:.:...
  Fly   371 LTGTVQFVEGRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDSNIANI---TLVVMTR 432

  Fly   189 GSSPRLIVYRD--LEGKLIFSGPVGNFMKSFEQ----RYNCRLV--QPYPFDESAISPARDLIAS 245
            ...|.::|..|  |.|.|.|.|...:.:|:...    :|...||  ..|.......:....::..
  Fly   433 EERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQE 497

  Fly   246 VQNGSVQIALGAI---YPQVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMVFSPMAFGI---T 304
            :......:|:.::   |.:.....::.|...:...::..||...| ::|:|.: :|:|..|   .
  Fly   498 LMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQP-TRLFSFM-NPLAIEIWLYV 560

  Fly   305 IVAMVLISLTLSMALRLHGYR-------------------VSFSEYFLHDSCLR---GVLSQSFY 347
            :.|.:|:|..|.:..|...|.                   :|.|.:|:..:.||   |:..::  
  Fly   561 LAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKA-- 623

  Fly   348 EVLRAPALIKAMYLVICLLGLLITSWYNSYFSTFVT---------SAPRFPQLT--SYESI---- 397
               .:..::...:...|   |:|.|.|.:..:.|:|         ||....:.|  ||.::    
  Fly   624 ---TSTRIVGGCWFFFC---LIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGS 682

  Fly   398 -----RHSNIKIVIWKPEYEMLLFFSENMEKYSSIFQLQEDYKEFLHLRDSFDTRYGYMMPMEKW 457
                 |.|.|.|      |:.:..:.|| .|.:...:..||     .::...:..|.::|.    
  Fly   683 TMTFFRDSKIGI------YQKMWRYMEN-RKTAVFVKTYED-----GIKRVMEGSYAFLME---- 731

  Fly   458 SLMKEQQRVFSSPLFSLQDDLCVFHTV---------PIVFPMVKNSIFKEPFDRLILDVTATGLL 513
            |.|.:         :::|.| |....:         .|..|  |.|.:::.....||::...|::
  Fly   732 STMLD---------YAVQRD-CNLTQIGGLLDSKGYGIATP--KGSPWRDKISLAILELQEKGII 784

  Fly   514 ----SRW---------RDMSFTEMIKAGQLGLEDRGHPKEFRAMKVGDLIQIWRFVGWMLGLATI 565
                .:|         ||....|. ||..||:|:.|  ..|..:..|            |.||.:
  Fly   785 QILYDKWWKNTGDVCNRDDKSKES-KANALGVENIG--GVFVVLLCG------------LALAVV 834

  Fly   566 VFLLELICFWRHKMWQNMKYMFCRNKNI 593
            |.:.| .|      |.:.|.:...|:::
  Fly   835 VAIFE-FC------WNSRKNLNTENQSL 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94dNP_001138099.1 None
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 27/168 (16%)
ANF_receptor 61..393 CDD:279440 27/151 (18%)
PBP2_iGluR_Kainate 424..793 CDD:270432 74/409 (18%)
Lig_chan 555..829 CDD:278489 61/324 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463121
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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