DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94d and Ir100a

DIOPT Version :9

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:645 Identity:125/645 - (19%)
Similarity:243/645 - (37%) Gaps:133/645 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LHLLLVALV--LLSPGGDSFYHSLIHHLNRELKIEYVLLLGNFDTTWLDI---LWQLPVSVLQIK 63
            |.|:::|||  .|....::.:..::..:.::|:....|.|...:....|:   |.|...|:: |.
  Fly     5 LQLIMLALVGGTLGQANNTDHKQVLTSIVKQLEGGLELHLRTSEDGGNDLVQFLMQEKSSII-IS 68

  Fly    64 EHSRETYSLLENPSHNVLTIAFVNDSPEDILEILYRNLRMLNTQP-VLLVIRKSTIRVNSLL--- 124
            ....|..|..:...|:.    |:.|....:.||   ...:.||.. .:|.:..:||..:.||   
  Fly    69 AKQEEVPSRAKIMRHHF----FIFDGVHQMQEI---RTSLFNTDGFYILALENNTIEDDVLLMEF 126

  Fly   125 ---EWCWH-HQLLKVVAIAQDFMESLIVYSYNPFPVLQFIERRLDNSTVIFEKRLENLHGYEVPI 185
               .|..| |..:..|.:::   :|:::  :|||  ||.:....|:.|  :.:..::|.||.:.|
  Fly   127 AADVWLQHGHSRIYYVQLSK---KSVLL--FNPF--LQRLVVVQDSKT--YSRIYKDLEGYHLRI 182

  Fly   186 ALGGSSPRLIVYR----DLEGKLI-FSGPVGNFMKSFEQRYNCRLVQPYPFDE-----SAISPAR 240
            .:..|     ||.    |.|.|:: .:|......|:..::.|......:|.||     .|.....
  Fly   183 YIFDS-----VYSSVIGDGENKVLSVTGADAKLAKTVARQLNFTADFVWPDDEFFGGRLANGEYS 242

  Fly   241 DLIASVQNGSVQIALGAIY------PQVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMVFSPM 299
            ..:.....|.|.|.....:      ..:.::...|..||   ||.:...:.:|.|.|      |:
  Fly   243 GGVGRAHRGEVDIIFAGFFIKDYLTTHIQFSAAVYMDEL---CLYVKKAQRIPQSIL------PL 298

  Fly   300 AFGI---------------TIVAMVLISLTLSMALR--LHGYRVSFSEYFLHDSCLRGVLSQSFY 347
             |.:               .:|.::|.::.|.:.:.  ..|.|.:...||       |...:.|.
  Fly   299 -FAVHMDVWLCFLLVGLLGALVWLILRAVNLILGIEGVPDGSRATRISYF-------GAARRIFV 355

  Fly   348 E---------VLRAPALIKAMYLV--ICLLGLLITSWYNSYFSTFVTSAPRFPQLTSYESIRHSN 401
            :         |.|.|........|  :||:.::..:...|..:|.......:..:.:...:..|.
  Fly   356 DTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALLESSLATVYIRPLYYRDVNTLRELDESG 420

  Fly   402 IKIVIWKPEYEMLLFFSENMEKYSSIFQLQEDYKEFL------HLRDSFDTRYGYMMPMEKWSL- 459
            ..|.|..|.::..||:..|.|.|..:     |.|..|      .|.:....|.|:.......|| 
  Fly   421 QPIYIKHPAFKDDLFYGHNSEVYRRL-----DAKMMLVAEGEERLIEMVSKRGGFAGVTRSASLQ 480

  Fly   460 MKEQQRVFSSPLFSLQDDLCVFHTVPIVFPMVKNSIFKEPFDRLILDVTATGLL----------S 514
            :.:.:.|.:..:..:.:....:|   |.:.:.:.|.:.|..:|::|.:.|.|::          :
  Fly   481 LSDIRYVMTKKVHKIPECPKNYH---IAYVLPRPSPYLEEVNRIVLRLVAGGIVGLWTGEAKERA 542

  Fly   515 RWRDMSFTEMIKAGQLGLEDRGHPKEFRAMKVGDLIQIWRFVGWMLG--LATIVFLLELI 572
            :|....|.|.:....:|        .::.:.:.| :|: .|....:|  |:.||.:.|::
  Fly   543 KWSIQRFPEYLAELDVG--------RWKVLTLSD-VQL-AFYALTIGCLLSAIVCMAEIL 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94dNP_001138099.1 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 8/44 (18%)
Lig_chan <439..580 CDD:278489 27/158 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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