Sequence 1: | NP_001138099.1 | Gene: | Ir94d / 7354412 | FlyBaseID: | FBgn0259193 | Length: | 593 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106655.1 | Gene: | Gria4 / 29629 | RGDID: | 61863 | Length: | 902 | Species: | Rattus norvegicus |
Alignment Length: | 554 | Identity: | 98/554 - (17%) |
---|---|---|---|
Similarity: | 169/554 - (30%) | Gaps: | 193/554 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 143 MESLIVYSYNPFPVLQFIERRLDNSTVIFEKRLENLHGYEVPIALGGSSPRLIVYRD----LEGK 203
Fly 204 LIFSG----PVGNFMKSFEQRYNCRLVQPYPFDESAISPARDLIASVQNGSV-QIALG----AIY 259
Fly 260 P------QVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMVFS---PMAFGI---TIVAMVLIS 312
Fly 313 LTLSMALRLHGYRVSFSEYFLHDSCLR--------------GVLSQSFYEV---LRAPALIKAMY 360
Fly 361 LVICLLG-------LLITSWYNSYFSTFVTSAPRFPQLTSYESI--------------------R 398
Fly 399 HSNIKIVIWKPEYEMLLFFSENME------------------KYSSIFQLQEDYKEFLHLRDSFD 445
Fly 446 TR----------YGYMMPMEKWSLMKEQQRVFSSPLFSLQDDLCVFHTVPIVFPMVKNSIFKEPF 500
Fly 501 DRLILDVTATGLLSR-----WRDMSFTEMIKAGQLGLEDRGHPKEFRAMKVGDLIQIWRFVGWML 560
Fly 561 GLATIVFLLELICFWRHKMWQNMKYMF---CRNK 591 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir94d | NP_001138099.1 | None | |||
Gria4 | NP_001106655.1 | PBP1_iGluR_AMPA_GluR4 | 28..398 | CDD:107383 | 2/4 (50%) |
ANF_receptor | 39..380 | CDD:279440 | |||
PBP2_iGluR_AMPA_GluR4 | 414..795 | CDD:270445 | 78/465 (17%) | ||
Lig_chan | 546..825 | CDD:278489 | 48/337 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350173 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |