DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94d and GRIN2B

DIOPT Version :9

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_000825.2 Gene:GRIN2B / 2904 HGNCID:4586 Length:1484 Species:Homo sapiens


Alignment Length:423 Identity:79/423 - (18%)
Similarity:140/423 - (33%) Gaps:177/423 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 PFDESAISPARDLIASVQNGSVQIALGAIYPQVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSM 294
            ||.|:.||    ::.|..||:|.                                  |     |.
Human   528 PFIETGIS----VMVSRSNGTVS----------------------------------P-----SA 549

  Fly   295 VFSPMAFGITIVAMVLISLTLSMALRLHGYRVSFSEYFL---HDSCL---RGVLSQSFYEVLRAP 353
            ...|.:..:.::..|::.:..::|       |...|||.   ::.||   |.....||       
Human   550 FLEPFSADVWVMMFVMLLIVSAVA-------VFVFEYFSPVGYNRCLADGREPGGPSF------- 600

  Fly   354 ALIKAMYLVICLLGLLITSWYNSYFSTFVTSAP-RFPQLTSYESIRHSNIKIVIWKPEYEMLLF- 416
            .:.||::|   |.||:           |..|.| :.|:.|:      |.|.:.:|  .:..::| 
Human   601 TIGKAIWL---LWGLV-----------FNNSVPVQNPKGTT------SKIMVSVW--AFFAVIFL 643

  Fly   417 --FSENMEKYSSIFQLQEDY---------KEF---------------------LHLRDSFDTRYG 449
              ::.|:    :.|.:||:|         |:|                     .::|:::...:.
Human   644 ASYTANL----AAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMHA 704

  Fly   450 YMMPMEKWSLMKEQQRVFSSPLFSL--------------------QDDLC---------VFHTVP 485
            ||        .|..||.....|.||                    :|:.|         ||.:..
Human   705 YM--------GKFNQRGVDDALLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTG 761

  Fly   486 IVFPMVKNSIFKEPFDRLILDVTATGLLSRWRDMSFTEMIKAGQLGLEDRGHPKEFRAMK----V 546
            ....:.|:|.:|...|..||.:...|           ||.:...|.|....|.::...|.    :
Human   762 YGIAIQKDSGWKRQVDLAILQLFGDG-----------EMEELEALWLTGICHNEKNEVMSSQLDI 815

  Fly   547 GDLIQIWRFVGWMLGLATIVFLLELICFW--RH 577
            .::..::..:|..:.|:.|.|:.|.:.:|  ||
Human   816 DNMAGVFYMLGAAMALSLITFICEHLFYWQFRH 848

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ir94dNP_001138099.1 None
GRIN2BNP_000825.2 PBP1_iGluR_NMDA_NR2 33..393 CDD:107373
PBP2_iGluR_NMDA_Nr2 403..803 CDD:270436 69/376 (18%)
HisJ <459..>542 CDD:223904 6/17 (35%)
Lig_chan 557..829 CDD:278489 60/330 (18%)
Pore-forming. /evidence=ECO:0000250|UniProtKB:A7XY94 604..623 9/32 (28%)