DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir94d and GRIN2A

DIOPT Version :9

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:679 Identity:116/679 - (17%)
Similarity:218/679 - (32%) Gaps:279/679 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLHLLLVALVLLSPGGDSFYHSLIHHLNRELKIEYVLLLGNFDTTWLDI---LWQLPVSVLQIKE 64
            |:|..||.:|                ||::.:.|.|   |.::...|.:   :|.          
Human   408 QVHPRLVVIV----------------LNKDREWEKV---GKWENHTLSLRHAVWP---------- 443

  Fly    65 HSRETYSLLENPSHNVLTIAFVNDSPEDILEILYRNLRMLNTQPVLLVIRKSTIRVNSLLEWCWH 129
             ..:::|..| |..|.|:|..:.::|..|:|                       .::.|.|.|..
Human   444 -RYKSFSDCE-PDDNHLSIVTLEEAPFVIVE-----------------------DIDPLTETCVR 483

  Fly   130 HQLLKVVAIAQDFMESLIVYSYNPFPVLQFIERRLDNST--------------VIFEKRLENL-- 178
                                  |..|..:|:  :::|||              :...|:|...  
Human   484 ----------------------NTVPCRKFV--KINNSTNEGMNVKKCCKGFCIDILKKLSRTVK 524

  Fly   179 HGYEVPIALGGSSPRLI--VYRDLEGKLIFSG---PVGNFMKSFEQRYNCRLVQ-PYPFDESAIS 237
            ..|::.:...|...:.:  |:..:.|::::..   .||:...:.|:   ..:|. ..||.|:.||
Human   525 FTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEER---SEVVDFSVPFVETGIS 586

  Fly   238 PARDLIASVQNGSVQIALGAIYPQVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMVFSPMAFG 302
                ::.|..||:|.                                  |     |....|.:..
Human   587 ----VMVSRSNGTVS----------------------------------P-----SAFLEPFSAS 608

  Fly   303 ITIVAMVLISLTLSMALRLHGYRVSFSEYFLHDSCLRGVLSQSFYEVLRAP-----ALIKAMYLV 362
            :.::..|::.:..::|:.:..|   ||....:.:..:|          :||     .:.||::| 
Human   609 VWVMMFVMLLIVSAIAVFVFEY---FSPVGYNRNLAKG----------KAPHGPSFTIGKAIWL- 659

  Fly   363 ICLLGLLITSWYNSYFSTFVTSAP-RFPQLTSYESIRHSNIKIVIWKPEYEMLLF---FSENMEK 423
              |.||:           |..|.| :.|:.|:      |.|.:.:|  .:..::|   ::.|:  
Human   660 --LWGLV-----------FNNSVPVQNPKGTT------SKIMVSVW--AFFAVIFLASYTANL-- 701

  Fly   424 YSSIFQLQEDY---------KEFLHLRD-----SFDT------------RYGYMMPMEKWSLMKE 462
              :.|.:||::         |:|....|     .|.|            .|.||...    :.|.
Human   702 --AAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQY----MTKF 760

  Fly   463 QQRVFSSPLFSL--------------------QDDLC---------VFHTVPIVFPMVKNSIFKE 498
            .|:.....|.||                    :|:.|         :|.|......:.|.|.:|.
Human   761 NQKGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKR 825

  Fly   499 PFDRLILDVTATGLLSRWRDMSFTEMIKAGQLGLEDRGHPKEFRAMK----VGDLIQIWRFVGWM 559
            ..|..:|.....|           ||.:...|.|....|.::...|.    :.::..::..:...
Human   826 QIDLALLQFVGDG-----------EMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAA 879

  Fly   560 LGLATIVFLLELICFWRHKMWQNMKYMFC 588
            :.|:.|.|:.|.:.:|        |..||
Human   880 MALSLITFIWEHLFYW--------KLRFC 900



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156046
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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