DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94d and GRIK4

DIOPT Version :9

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001269399.1 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:538 Identity:92/538 - (17%)
Similarity:167/538 - (31%) Gaps:184/538 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 WHHQLLKVVAIAQDFMESLIVYSYNPFPVLQFIERRLDNSTVIFEKRLENLHGYEVPIALGGSSP 192
            ||        :|:.......:|:.|       |...|.|:|::....|||.:     :.|.|:  
Human   392 WH--------VAEGLSMDSHLYASN-------ISDTLFNTTLVVTTILENPY-----LMLKGN-- 434

  Fly   193 RLIVYRDLEGKLIFSGPVGNFMKSFEQ----RYNCRLVQP--YPFDES----------------- 234
                ::::||...:.|...:.:|...:    .|..|||..  |...|:                 
Human   435 ----HQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKAD 495

  Fly   235 ------AISPARDLIASVQNGSVQIALGAIY----PQVPYTGYSYPIELMSWCLMMPVPEEVPHS 289
                  .|:..|:.:.......:.:.:..:|    .:.|  ||                      
Human   496 LAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKP--GY---------------------- 536

  Fly   290 QLYSMV--FSPMAFGITIVAMVLISLTLSMALRLHGYRVSFSEYFLHDSCLRGVLSQSFYEVLRA 352
              :|.:  |||..:...::|.:.:|..|.:..||..|     |::....|.:|          |.
Human   537 --FSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPY-----EWYSPHPCAQG----------RC 584

  Fly   353 PALIKAMYLVICLLGLLITSWY--NSYFSTFVTSAPRFPQLTSYESIRHSNIKIVIWKPEYEMLL 415
            ..|:....|...|       |:  ..:.....|.|||        ::....:..|.|.....::.
Human   585 NLLVNQYSLGNSL-------WFPVGGFMQQGSTIAPR--------ALSTRCVSGVWWAFTLIIIS 634

  Fly   416 FFSENMEKYSSIFQLQEDYKEFLHLRDSFDTRYG---------------YMMPMEKWSLM-KEQQ 464
            .::.|:..:.::.::....:....|.|.....||               |......|:.| .:|.
Human   635 SYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQP 699

  Fly   465 RVF-------------SSPLFSLQDDLCVFH---------------TVPIVFPMVKNSIFKEPFD 501
            .||             |:..|.|:..:..::               |......|...|:|::.||
Human   700 SVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFD 764

  Fly   502 RLILDVTATGLLSRWRDMSFTEMIK-----AGQLGLEDRGHPKEFRAMKVGDLIQIWRFVGWMLG 561
            ..||.:.....|         |::|     .|:...|:....|......:|.:     ||..:.|
Human   765 LAILQLQENNRL---------EILKRKWWEGGKCPKEEDHRAKGLGMENIGGI-----FVVLICG 815

  Fly   562 LATIVFLLELICFW--RH 577
            |...:|:..|...|  ||
Human   816 LIVAIFMAMLEFLWTLRH 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94dNP_001138099.1 None
GRIK4NP_001269399.1 PBP1_iGluR_Kainate_KA1_2 26..400 CDD:107389 3/15 (20%)
ANF_receptor 43..382 CDD:279440
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 72/445 (16%)
Lig_chan 547..816 CDD:278489 51/312 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155781
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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