DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir94d and LOC110438919

DIOPT Version :9

Sequence 1:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:641 Identity:117/641 - (18%)
Similarity:222/641 - (34%) Gaps:231/641 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VLLLGNFDTTWLDILWQLPVSVLQIKEHSRETYSLLENP---SHNVLTIAFVNDSPEDILEIL-- 97
            |::|.:.:..| |.:.:.....|.:|.|....:.|...|   ..:.|:|..:.::|..|:|.:  
Zfish   225 VIILLDKERQW-DRVGKWENGSLSMKYHVWPRFELYSGPEAREDDHLSIVTLEEAPFVIVEDVDP 288

  Fly    98 YRNLRMLNTQPVLLVIRKSTIRVNSLLE-----------WCWHHQLLKVVAIAQDFMESLIVYSY 151
            .....|.||.|    .||....:|...:           :|  ..:||.:|       ..:.::|
Zfish   289 LSGTCMRNTVP----CRKQLKALNQTQDSAVYIKRCCKGFC--IDILKKIA-------KNVKFTY 340

  Fly   152 NPFPVLQFIERRLDNST---VIFEKRLENLHGYEVPIALGGSSPRLIVYRDLEGKLIFSGPVGNF 213
            :.:.|......:..|.|   ::.|..|:|.|     :|:|.    |.:..:....:.||      
Zfish   341 DLYLVTNGKHGKKINGTWNGMVGEVVLKNAH-----MAVGS----LTINEERSEVIDFS------ 390

  Fly   214 MKSFEQRYNCRLVQPYPFDESAISPARDLIASVQNGSVQIALGAIYPQVPYTGYSYPIELMSWCL 278
                           .||.|:.||    ::.|..||:|.                          
Zfish   391 ---------------VPFIETGIS----VMVSRSNGTVS-------------------------- 410

  Fly   279 MMPVPEEVPHSQLYSMVFSPMAFGITIVAMVLISLTLSMALRLHGYRVSFSEYFL---HDSCL-- 338
                    |     |....|.:..:.|:..|::.|..::|       |...|||.   ::.||  
Zfish   411 --------P-----SAFLEPFSADVWIMMFVMLLLVSAIA-------VFIFEYFSPVGYNRCLAD 455

  Fly   339 -RGVLSQSFYEVLRAPALIKAMYLVICLLGLLITSWYNSYFSTFVTSAP-RFPQLTSYESIRHSN 401
             |.....||       .:.||::|   |.||:           |..|.| :.|:.|:      |.
Zfish   456 GREAGGPSF-------TIGKAIWL---LWGLV-----------FNNSVPVQNPRGTT------SK 493

  Fly   402 IKIVIWKPEYEMLLF---FSENMEKYSSIFQLQEDY---------KEF----------------- 437
            |.:.:|  .:..::|   ::.|:    :.|.:||:|         |:|                 
Zfish   494 IMVSVW--AFFAVIFLASYTANL----AAFMIQEEYVDQVSGLSDKKFQNPNDFSPPFRFGTVPN 552

  Fly   438 ----LHLRDSFDTRYGYMMPMEKWSLMKEQQRVFSSPLFSL------------QDDLC------- 479
                .::|:::...:.||:...:.::::..:.:.:..|.:.            :|:.|       
Zfish   553 GSTERNIRNNYRDMHSYMVKFHQRNVVEALESLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGS 617

  Fly   480 --VFHTVPIVFPMVKNSIFKEPFDRLILDVTATGLLSRWRDMSFTEMIKAGQLGLEDRGHPKEFR 542
              ||.:......:.|:|.:|...|..||.:...|           ||.:...|.|....|.::..
Zfish   618 GKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDG-----------EMEELEALWLTGICHHEKNE 671

  Fly   543 AMK----VGDLIQIWRFVGWMLGLATIVFLLELICFWRHKMWQNMKYMF---CRNK 591
            .|.    |.::..::..:|..:.|:.|.|:.|.:.:|      :|::.|   |..|
Zfish   672 VMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHVFYW------HMRFCFMGVCSGK 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir94dNP_001138099.1 None
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 7/30 (23%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 95/536 (18%)
DUF4013 <389..478 CDD:315788 33/180 (18%)
NMDAR2_C 704..1417 CDD:313729 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591430
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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