DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42381 and cmc4

DIOPT Version :10

Sequence 1:NP_001137733.1 Gene:CG42381 / 7354409 FlyBaseID:FBgn0259727 Length:76 Species:Drosophila melanogaster
Sequence 2:NP_001289931.1 Gene:cmc4 / 100333981 ZFINID:ZDB-GENE-120216-1 Length:64 Species:Danio rerio


Alignment Length:55 Identity:27/55 - (49%)
Similarity:36/55 - (65%) Gaps:1/55 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TRKDPCKPNACRIQACLTKNHYQEDKCLDVLEAMRQCC-LKWHKESLCCSGIDLE 57
            ::||||:..||.||.||..|.|.|.:|.||:.||::|| |...:.|:||||...|
Zfish     2 SQKDPCQKQACAIQKCLQANRYIESRCEDVIRAMKKCCELHTGENSVCCSGFAKE 56

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42381NP_001137733.1 MTCP1 8..58 CDD:430360 25/51 (49%)
cmc4NP_001289931.1 MTCP1 6..53 CDD:430360 23/46 (50%)

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