DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Yeti and swc5

DIOPT Version :10

Sequence 1:NP_001137537.1 Gene:Yeti / 7354404 FlyBaseID:FBgn0267398 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_588440.1 Gene:swc5 / 2539444 PomBaseID:SPCC576.13 Length:215 Species:Schizosaccharomyces pombe


Alignment Length:224 Identity:58/224 - (25%)
Similarity:87/224 - (38%) Gaps:65/224 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TRHCDGDNREYRSKECDDLHSEEE--SEKSRSDALWADFLGDIDTKSVI--NQKTDYTEGNAASA 117
            |....||:.:..|...|...||||  .||..|...        .|||.|  ::..|.|..|.|..
pombe    17 TEFVPGDSTDTESSFSDADSSEEEFVEEKEASQVQ--------STKSKIATSESEDVTLKNIAKK 73

  Fly   118 TNTNTHETCNKYDKNDTAI-------------IKTAQQYDSKRTTLSVST--------------- 154
                     ||.::||..|             :::..:.:.|...|:.|.               
pombe    74 ---------NKRERNDKLIPQQSNESEAIEKPVQSTTEVELKTNELAESNSSVAVEGDENSYAET 129

  Fly   155 -------LGKIKRSSAEKSIGTMINKFEKKKKLTVLERSQLDW-KIFKQDEGIDELLCSHNKGKD 211
                   :.|.::|..:.|   ...|..||.||..||::|.:| |..|:.:..|||..::   ||
pombe   130 PKKKHSLIRKRRKSPLDSS---SAQKVLKKNKLNTLEQAQQNWSKYIKEQDIQDELRIAN---KD 188

  Fly   212 GYLDRQDFLERTDLRQFEMEKKLRLSRRP 240
            ||::||:||.:|  |....||...:.:.|
pombe   189 GYVERQEFLAKT--RAAHEEKIREMKKLP 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YetiNP_001137537.1 BCNT 176..237 CDD:462213 25/61 (41%)
swc5NP_588440.1 BCNT 146..213 CDD:462213 27/74 (36%)

Return to query results.
Submit another query.