DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir60d and Ir10a

DIOPT Version :10

Sequence 1:NP_001137757.2 Gene:Ir60d / 7354402 FlyBaseID:FBgn0259187 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster


Alignment Length:669 Identity:132/669 - (19%)
Similarity:235/669 - (35%) Gaps:206/669 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LSSLLMSLGKELHYKTILLVGGSS--------TCWSLEPFETGVPILNLRGENNAYPQDTFNSQM 76
            |:.||:...::|....:.|..||.        ..|.|...|..:.|:..: ||..:..|.|..:.
  Fly    23 LNGLLVEPTRDLPQLELWLRAGSDHQDAENPYVQWFLLRTEIPLSIVTYQ-ENRYWMDDPFGRRN 86

  Fly    77 LALAC----LQTESEDAVKLLYRSL---------KDMRDTPTLLFASS------EEHIHDTLFLG 122
            |.|..    |.|....|..:...|.         ||:.....|....|      :..:::..|| 
  Fly    87 LVLVMSLDQLLTNRGAAAPIQKASTFFYILADQDKDLSADEQLRLEGSCRQLWTQHKVYNRFFL- 150

  Fly   123 CFRENMLNVLALTASSKEFIYSYQAFPTFRVIKRK---LVEIHRYFEPQ------LKDLGGH--- 175
                           :::.::.|..|      ||:   ...:.||:..:      .:|:.|:   
  Fly   151 ---------------TRDGVWIYDPF------KRRDSAFGRLVRYYGSETLDKLLFRDMAGYPLR 194

  Fly   176 ----------------------------IVSALPGNIMPRTMCYRNAE----GERQLAGYLN--- 205
                                        :|:.:....:..||..:..|    |||...|..|   
  Fly   195 IQMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAI 259

  Fly   206 --------------TFIRNYV--ESINGTLRISWGLVPEDDMRHLTISRLSKIQHVDFPLGIIPL 254
                          .|:::|:  :.::.|:.:      .||...:.:.:.|:|     |..|:|:
  Fly   260 GSIIKDGLDICLTGFFVKDYLVQQYMDFTVAV------YDDELCIYVPKASRI-----PQSILPI 313

  Fly   255 YNKTDKQHVYMEISSWFLMLPMETSVPRAHLFVKLGLERLLPIIVVVGAVLGNAHRIEVGLG--- 316
            :      .|..:|...|::    |:...|.:::.|.:..|...||    .|||.|.:...||   
  Fly   314 F------AVGYDIWLGFVL----TAFACALIWLTLRVINLKLRIV----SLGNQHIVGQALGIMV 364

  Fly   317 PSWRCYYLADKVLRGALAQPIVLPRRLSPKLMLIYSLLLLSGFFLSNYYMASLTTWLVHPPASDR 381
            .:|..:      :|..|:.   ||...:.: |.|.:|.|:|..| ...:.:||.|..:||.....
  Fly   365 DTWVVW------VRLNLSH---LPASYAER-MFIGTLCLVSVIF-GAIFESSLATVYIHPLYYKD 418

  Fly   382 ILEWDQLRYLHLKVLTIPEEFKYMSLILGTD-FMTAYGSIFQLTNSTDFQRRRISMDPSYAYPVT 445
            |....:|....|||:     :||.|  :..| |.:....:|...|      :::|.:......|.
  Fly   419 INTMQELDESGLKVV-----YKYSS--MADDLFFSETSPLFASLN------KKLSWNRDLRADVI 470

  Fly   446 ---------------TSLWPFLELSQVRLRRPLFRRSYDMVLQP----FQVMSLPLPRNSIFHKS 491
                           |||  .||.|...|.|.::       :.|    :..:|..:||:|.:..:
  Fly   471 DEVARFRNKAGVSRYTSL--ILESSHFTLLRKIW-------VVPECPKYYTISYVMPRDSPWEDA 526

  Fly   492 ----LLRYAALTRETGLYYYWFR--RSYYELVALGKISYKEEEGNPYCDLKWNDFRIVWLAFLGG 550
                |||:.    ..||...|.:  :|:.::.....|...:.|......|...|.::.:...:||
  Fly   527 VNALLLRFL----NAGLIVKWIQDEKSWVDIKMRSNILEADAESELVRVLTIGDLQLAFYVVIGG 587

  Fly   551 TIISCLALLLEVAHYRWHL 569
            .:::.|..|.|  |:||.|
  Fly   588 NLLAFLGFLAE--HFRWKL 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60dNP_001137757.2 None
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 12/79 (15%)

Return to query results.
Submit another query.