DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir60d and glr-8

DIOPT Version :10

Sequence 1:NP_001137757.2 Gene:Ir60d / 7354402 FlyBaseID:FBgn0259187 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:150 Identity:40/150 - (26%)
Similarity:58/150 - (38%) Gaps:46/150 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 ISMDPSYAY--PVTT-SLWPFLELSQVRLRRPLFRRSYDMVLQPFQVMSLPLPRNSIFHKSLLRY 495
            :..:|.||.  |:.| :.:.:.:...:     ||.   |.:|..:  :|:||.:|||:.......
 Worm   352 VRANPGYALLGPMATLNFYAYSDCKVI-----LFN---DGILPVY--LSIPLVKNSIYSPYFSTK 406

  Fly   496 AALTRETGLYYYWFR--RSYYELVALGKISYKEEEGN-------PYCDLK------WNDFRIVWL 545
            .....|.|....|..  |||   ||:.||:    |.|       .|.|||      |        
 Worm   407 IREMVERGFTQKWIADYRSY---VAMQKIN----ECNSTTIGPKSYLDLKRAQGAFW-------- 456

  Fly   546 AFLGGTIISCLALLLEVAHY 565
            .||||   :.|.|.|.|..:
 Worm   457 VFLGG---AGLGLALFVGEF 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir60dNP_001137757.2 None
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 18/81 (22%)

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