Protein Alignment Spf30 and Smndc1

DIOPT Version :10

• Sequence 1: NP_001138001.1
• Gene: Spf30 / 7354399
• FlyBaseID: FBgn0039977
• Length: 243
• Species: Drosophila melanogaster
• Sequence 2: NP_001020571.1
• Gene: Smndc1 / 287768
• RGDID: 1309151
• Length: 238
• Species: Rattus norvegicus
• Alignment Length: 249
• Identity: 107/249 - (42%)
• Similarity: 133/249 - (53%)
• Gaps: 33/249 - (13%)

  Fly     1 MADDLHNYKLQLQQVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQLEEQNKSSYVEPSSTK 65
            :|..|.:||.|||||||||..:.|||:||||:.||.|||.||:||:.||           ||.|.
  Rat     5 LAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQ-----------PSETL 58

  Fly    66 RDSSNYFDEIEAALLEAEKLVSAAKIWKKGDKCQAKWKEDRQYYDATIEDI-SSTGEVNVIFDAY 129
            ..|.::..            ......||.||||.|.|.||.|.|:|.||:| ...|...:.|..|
  Rat    59 TSSDSFAS------------TQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAVY 111

  Fly   130 QNRSTT------HVNELRERTIRNEVFPSNKRHR-PNQKEYLKKRKQKKQQRFKDLEEERESDKN 187
            .|...|      .|.|.|:....:...|.:|:.. ..|:||.||:..||.||.|:||:|||..|.
  Rat   112 GNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKV 176

  Fly   188 KWLNFNNKNQKKN--GMKARSIFASPDNVSGRVGVGTCGTAGKGMTDFTVGEKY 239
            ||..|||:...||  |...|||||||::|:|:|||||||.|.|.||.:....||
  Rat   177 KWQQFNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spf30	NP_001138001.1	Tudor_SPF30	92..146	CDD:410470	24/60 (40%)
Smndc1	NP_001020571.1	Tudor_SPF30	73..128	CDD:410470	22/54 (41%)
		Nuclear localization signal. /evidence=ECO:0000255	142..160		6/17 (35%)