DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42375 and cmc2

DIOPT Version :9

Sequence 1:NP_001138048.1 Gene:CG42375 / 7354380 FlyBaseID:FBgn0259721 Length:80 Species:Drosophila melanogaster
Sequence 2:XP_012816722.1 Gene:cmc2 / 733988 XenbaseID:XB-GENE-1016226 Length:113 Species:Xenopus tropicalis


Alignment Length:74 Identity:35/74 - (47%)
Similarity:42/74 - (56%) Gaps:4/74 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSSHLHTPACNKLIEELQACHENNAFAKFVGVCNSIDDKVVKCLKGERIARSAANRAKARERQAK 69
            |||||||..||..|..|:.||..|.|.|:.|.||..|.::.||||.|...|    |||:|.|...
 Frog    39 LSSHLHTDECNVAINLLKKCHSENQFLKYFGQCNDFDREMRKCLKKEYEDR----RAKSRARSEH 99

  Fly    70 YKEKLLQQE 78
            .|::||..|
 Frog   100 MKQRLLNAE 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42375NP_001138048.1 Cmc1 1..71 CDD:400756 31/65 (48%)
cmc2XP_012816722.1 Cmc1 46..104 CDD:285749 25/61 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9526
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 73 1.000 Inparanoid score I5125
OMA 1 1.010 - - QHG45739
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005820
OrthoInspector 1 1.000 - - oto105445
Panther 1 1.100 - - LDO PTHR22977
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2462
SonicParanoid 1 1.000 - - X5555
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.100

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