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Protein Alignment CG42375 and cmc2
DIOPT Version :9
Sequence 1: | NP_001138048.1 |
Gene: | CG42375 / 7354380 |
FlyBaseID: | FBgn0259721 |
Length: | 80 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012816722.1 |
Gene: | cmc2 / 733988 |
XenbaseID: | XB-GENE-1016226 |
Length: | 113 |
Species: | Xenopus tropicalis |
Alignment Length: | 74 |
Identity: | 35/74 - (47%) |
Similarity: | 42/74 - (56%) |
Gaps: | 4/74 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LSSHLHTPACNKLIEELQACHENNAFAKFVGVCNSIDDKVVKCLKGERIARSAANRAKARERQAK 69
|||||||..||..|..|:.||..|.|.|:.|.||..|.::.||||.|...| |||:|.|...
Frog 39 LSSHLHTDECNVAINLLKKCHSENQFLKYFGQCNDFDREMRKCLKKEYEDR----RAKSRARSEH 99
Fly 70 YKEKLLQQE 78
.|::||..|
Frog 100 MKQRLLNAE 108
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG42375 | NP_001138048.1 |
Cmc1 |
1..71 |
CDD:400756 |
31/65 (48%) |
cmc2 | XP_012816722.1 |
Cmc1 |
46..104 |
CDD:285749 |
25/61 (41%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
69 |
1.000 |
Domainoid score |
I9526 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
73 |
1.000 |
Inparanoid score |
I5125 |
OMA |
1 |
1.010 |
- |
- |
|
QHG45739 |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0005820 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto105445 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR22977 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2462 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X5555 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
11 | 11.100 |
|
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