DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment lectin-22C and Clec4b1

DIOPT Version :9

Sequence 1:	NP_001137766.1	Gene:	lectin-22C / 7354375	FlyBaseID:	FBgn0259230	Length:	263	Species:	Drosophila melanogaster
Sequence 2:	NP_001177239.1	Gene:	Clec4b1 / 69810	MGIID:	1917060	Length:	209	Species:	Mus musculus

Alignment Length:	192	Identity:	45/192 - (23%)
Similarity:	79/192 - (41%)	Gaps:	40/192 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    89 LSIEVALDAQGRKLNVNEQNFTERLNCM-EG------ILSALEKTVLEVKTKIKYLGFEQIGSKY 146
            ::.:.::|...|:|  :|.:....|.|. ||      :.|...|            .::..||..
Mouse    39 VTYQFSMDKPNRRL--SELDRYHSLTCFSEGNMVSDKVWSCCPK------------DWKLFGSHC 89

  Fly   147 YYIEKV-SEKNWSTASKTCRNMGGHLADIKDEADLAAIKANLKEDTHYWLGINDLDH-EGKFLSM 209
            |.:..| |..:|:.:.:.|..||.||..|..:.:...|...|.....|::|:.|..| :.:::..
Mouse    90 YLVPTVFSSASWNKSEENCSRMGAHLVVIHSQEEQDFITGILDIHAAYFIGLWDTGHRQWQWVDQ 154

  Fly   210 -PTGKQTTFLKWASGRPSQLDTLNCVFLYNGEMY---------DYPCHYTFRFICQTEEEDL 261
             |..:..||  |.:|.||. |...||.:|    |         |..|:...:.:||.::.:|
Mouse   155 TPYEESVTF--WHNGEPSS-DNEKCVTVY----YRRNIGWGWNDISCNLKQKSVCQMKKINL 209

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lectin-22C	NP_001137766.1	CLECT	146..255	CDD:153057	30/120 (25%)
Clec4b1	NP_001177239.1	CLECT_DC-SIGN_like	78..204	CDD:153060	34/144 (24%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22802
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100