DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-22C and Cd209f

DIOPT Version :9

Sequence 1:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_081232.2 Gene:Cd209f / 69142 MGIID:1916392 Length:255 Species:Mus musculus


Alignment Length:165 Identity:36/165 - (21%)
Similarity:68/165 - (41%) Gaps:35/165 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SALEKTVLEVKTKIKYLGFEQI-----------------------------GSKYYYIEKVSEKN 156
            |:|:|  :.|..:..:.|.|||                             ||.|.:...:.  :
Mouse    87 SSLDK--VAVPREQTHSGLEQIQQIQQQLTQFNASLAGLCRPCPWDWELFQGSCYLFSRTLG--S 147

  Fly   157 WSTASKTCRNMGGHLADIKDEADLAAIKA-NLKEDTHYWLGINDLDHEGKFLSMPTGKQTTFLKW 220
            |.|::.:|.::|.||..:...::...:|. |::::...|:|::|..|||.: ....|....|..|
Mouse   148 WETSASSCEDLGAHLVIVNSVSEQRFMKYWNVRKNQRSWIGLSDHIHEGSW-QWVDGSALKFSFW 211

  Fly   221 ASGRPSQLDTLNCVFLYNGEMYDYPCHYTFRFICQ 255
            ..|.|:.....:||.|:..:..|..|.....::|:
Mouse   212 KEGEPNNDGDEDCVELFMDDWNDNKCTEQNFWVCE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 25/109 (23%)
Cd209fNP_081232.2 CLECT_DC-SIGN_like 127..246 CDD:153060 27/121 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.