DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-22C and Clec4a4

DIOPT Version :9

Sequence 1:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001005860.1 Gene:Clec4a4 / 474145 MGIID:3624119 Length:236 Species:Mus musculus


Alignment Length:158 Identity:42/158 - (26%)
Similarity:71/158 - (44%) Gaps:22/158 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 ERLNCMEGILSALEKTVLEVKTKIKYLGFEQIGSKYYYIEKVSEKNWSTASKTCRNMGGHLADIK 175
            :.|||::. .|.:|..|.....|    .::...|..|:|...|:.:|:.:.:.|.:||.||..|.
Mouse    88 KELNCIKN-GSLMEDKVWSCCPK----DWKPFVSHCYFILNDSKASWNESEEKCSHMGAHLVVIH 147

  Fly   176 DEADLAAIKANLKEDTHYWLGINDL-DHEGKFLSM-PTGKQTTFLKWASGRPSQLDTLNCVFL-- 236
            .:|:...|.:||.....|::|:.|. ..:.:::.. |..|..||  |..|.|:| |...||.:  
Mouse   148 SQAEQDFITSNLNTSAGYFIGLLDAGQRQWRWIDQTPYNKSATF--WHKGEPNQ-DWERCVIINH 209

  Fly   237 ------YNGEMYDYPCHYTFRFICQTEE 258
                  :|    |.||......:||.::
Mouse   210 KTTGWGWN----DIPCKDEHNSVCQVKK 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 32/118 (27%)
Clec4a4NP_001005860.1 CLECT_DC-SIGN_like 107..230 CDD:153060 34/133 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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