DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-22C and Clec4b2

DIOPT Version :9

Sequence 1:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001005896.2 Gene:Clec4b2 / 450222 RGDID:1359354 Length:208 Species:Rattus norvegicus


Alignment Length:199 Identity:44/199 - (22%)
Similarity:78/199 - (39%) Gaps:41/199 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VLVRQYTMEGQLTALQNKQLSIEVALDAQGRKLNVNEQNFTERLNCMEGILSALEKTVLEVKTKI 134
            |:..|:.||     ..|::||          :|:....|||   .|.:|.:         |..|:
  Rat    38 VVTYQFMME-----KPNRRLS----------ELHTYNSNFT---CCSDGTM---------VSGKV 75

  Fly   135 KYL---GFEQIGSKYYYIEKVSEKNWSTASKTCRNMGGHLADIKDEADLAAIKANLKEDTHYWLG 196
            ...   .::..||..|:.... ..||:.:.:.|.:||.||..|..:.:...|...|.....|:.|
  Rat    76 WSCCPKDWKSFGSHCYFTTDF-VANWNESKEKCSHMGAHLLVIHSQEEQDFINGILDTRWGYFTG 139

  Fly   197 INDL-DHEGKFLSM-PTGKQTTFLKWASGRPSQLDTLNCVFLYNGE-----MYDYPCHYTFRFIC 254
            ::|. .::.:::.. |..:..||  |....|:. |...||.:.:.:     ..|..|....:.||
  Rat   140 LSDQGQNQWQWIDQTPYNESVTF--WHEDEPNN-DYEKCVEINHHKDIGWGWNDIVCSSEHKSIC 201

  Fly   255 QTEE 258
            |.::
  Rat   202 QVKK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 25/115 (22%)
Clec4b2NP_001005896.2 CLECT_DC-SIGN_like 79..202 CDD:153060 27/126 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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