DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-22C and Colec10

DIOPT Version :10

Sequence 1:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001124013.1 Gene:Colec10 / 299928 RGDID:1307149 Length:277 Species:Rattus norvegicus


Alignment Length:150 Identity:45/150 - (30%)
Similarity:71/150 - (47%) Gaps:18/150 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 ILSALEKTVLEVKTKIKYL-----GFEQIGSKYYYIEKVSEKNWSTASKTCRNMGGHLADIKDE- 177
            ::..|:.:|..:||.:|::     |..:...|:|||.: .|||:..:...||..||.||..||| 
  Rat   127 VVGQLDISVARLKTSMKFIKNVIAGIRETEEKFYYIVQ-EEKNYRESLTHCRIRGGMLAMPKDEV 190

  Fly   178 -----ADLAAIKANLKEDTHYWLGINDLDHEGKFLSMPTGKQTTFLKWASGRPSQ-LDTLNCV-F 235
                 ||..|.....:    .::|:|||:.||:::.........:..|..|.||. ....:|| .
  Rat   191 VNTLIADYVAKSGFFR----VFIGVNDLEKEGQYVFTDNTPLQNYSNWKEGEPSDPYGHEDCVEM 251

  Fly   236 LYNGEMYDYPCHYTFRFICQ 255
            |.:|...|..||.|..|:|:
  Rat   252 LSSGRWNDTECHLTMYFVCE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 37/116 (32%)
Colec10NP_001124013.1 gly_rich_SclB <46..>116 CDD:468478
CLECT_collectin_like 157..272 CDD:153061 39/119 (33%)
Blue background indicates that the domain is not in the aligned region.

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