DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-22C and Clec4m

DIOPT Version :9

Sequence 1:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:269 Identity:58/269 - (21%)
Similarity:107/269 - (39%) Gaps:54/269 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LCGLLALNLYGAWAESDVICPLKDPPSQCGGFCLGVLTPVLNHLT--------ISQNLANSNNSS 65
            |.|||.:.|:..:..::.  ..::.|.|      ..:...||.||        |||. .|.:...
  Rat    73 LAGLLLIILFQVFKTTNT--QWQEEPKQ------EKILEELNQLTDELMSRIPISQG-QNESMQE 128

  Fly    66 KANEVLVRQYTMEGQLTALQNKQLSIEVALDAQGRKLNVNEQNFTERLNCMEGIL---------- 120
            |.:|          |||.|:.:.||.......|...:   ::..:|:|..::..|          
  Rat   129 KISE----------QLTQLKVELLSRIPVFQVQNESM---QEKISEQLTQLKAELLSKIPSLQVQ 180

  Fly   121 --SALEK---TVLEVKTKIKYL------GFEQIGSKYYYIEKVSEKNWSTASKTCRNMGGHLADI 174
              |..||   .::::||::..|      .:..:....|::.| |::||:.|.:.|:.....|..|
  Rat   181 DESKQEKIYQQLVQMKTELLRLCRLCPWDWTFLLGNCYFLSK-SQRNWNDAVRACKEEKAQLVII 244

  Fly   175 KDEADLAAIKANLKEDTHYWLGINDLDHEGKFLSMP-TGKQTTFLK-WASGRPSQLDTLNCVFLY 237
            ..:.:...::...|.....|:|::||.:|..:|.:. :...:.|.| |..|.|:.:...:||...
  Rat   245 NSDEEQTFLQLTSKAKGPTWMGLSDLKNEATWLWVDGSTLSSRFQKYWNRGEPNNIGEEDCVEFA 309

  Fly   238 NGEMYDYPC 246
            .....|..|
  Rat   310 GDGWNDSKC 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 25/103 (24%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 25/114 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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