DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-22C and Sftpd

DIOPT Version :9

Sequence 1:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_037010.1 Gene:Sftpd / 25350 RGDID:3667 Length:374 Species:Rattus norvegicus


Alignment Length:151 Identity:42/151 - (27%)
Similarity:69/151 - (45%) Gaps:11/151 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 ERLNCMEGILSALEKTVLEVKTKIKYLGFEQIGSKYYYIEKVSEKNWSTASKTCRNMGGHLADIK 175
            :::..:.|.|..||......|....:...:.:|.|.:.... ||:.:..|.:.||..||.||..:
  Rat   228 QQMEALNGKLQRLEAAFSRYKKAALFPDGQSVGDKIFRAAN-SEEPFEDAKEMCRQAGGQLASPR 291

  Fly   176 DEADLAAIK----ANLKEDTHYWLGINDLDHEGKFLSMPTGKQTTFLKWASGRPSQL-DTLNCVF 235
            ...:.||::    |:.|.   .:|.:.|:..|||| :.|||:...:..||.|.|:.. ...|||.
  Rat   292 SATENAAVQQLVTAHSKA---AFLSMTDVGTEGKF-TYPTGEALVYSNWAPGEPNNNGGAENCVE 352

  Fly   236 LY-NGEMYDYPCHYTFRFICQ 255
            :: ||:..|..|......||:
  Rat   353 IFTNGQWNDKACGEQRLVICE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 34/114 (30%)
SftpdNP_037010.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..221
Collagen 41..89 CDD:189968
Collagen 66..124 CDD:189968
Collagen 114..172 CDD:189968
Surfac_D-trimer 223..268 CDD:286141 7/39 (18%)
CLECT 261..374 CDD:295302 36/118 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I5161
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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