DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-22C and Fcer2

DIOPT Version :10

Sequence 1:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001029096.1 Gene:Fcer2 / 171075 RGDID:619997 Length:331 Species:Rattus norvegicus


Alignment Length:295 Identity:76/295 - (25%)
Similarity:120/295 - (40%) Gaps:67/295 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SALLCGLLALNLYGAWAESDVICPLKDPPSQCGGFCLGVLTPVLNHLTISQNLANSNNSSKANEV 70
            :.:..|||||.|...|.....:..|.|...|           .::|:|.......||..::.::.
  Rat    34 TVMWAGLLALLLLWHWETEKSLKQLGDAAIQ-----------NVSHVTKDLQNYQSNQLAQKSQA 87

  Fly    71 LVRQYTMEGQLTALQNKQLSIEVAL-----DAQGRKLNVNEQN--FTERLNCMEGIL-------- 120
            |.....:| :|.|.|.:..|.:..|     :.|...:||..||  .::.||.::..|        
  Rat    88 LQMSQNLE-ELQAEQKQMKSQDSQLSQNLNELQEDLINVKSQNSELSQNLNTLQEDLVNVKSQGL 151

  Fly   121 -------SALEKTVLEV-KTKIK---------------YLGFEQIGSKYYYIEKVSEKNWSTASK 162
                   .:|||...|| |..|:               :|.|:|   |.||..:.| |.|..|..
  Rat   152 NEKRAASDSLEKLQEEVAKLWIEILMSKGTACNVCPKDWLHFQQ---KCYYFGEGS-KQWIQAKF 212

  Fly   163 TCRNMGGHLADI--KDEADLAAIKANLKEDTHYWLGINDLDHEGKFLSMPTGKQTTFLKWASGRP 225
            ||.::.|.|..|  :.|.|......|.||.   |:|:.||:.||:|: .|.|....:..|:.|.|
  Rat   213 TCSDLEGRLVSIHSQKEQDFLMQHINKKES---WIGLQDLNMEGEFV-WPDGSPVGYSNWSPGEP 273

  Fly   226 S---QLDTLNCVFLY-NGEMYDYPCH-YTFRFICQ 255
            :   |.:  :||.:. :|:..|..|. |...::|:
  Rat   274 NNGGQGE--DCVMMRGSGQWNDAFCRSYLDAWVCE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 35/115 (30%)
Fcer2NP_001029096.1 COG4372 60..>175 CDD:443500 28/126 (22%)
CLECT_DC-SIGN_like 186..306 CDD:153060 39/129 (30%)

Return to query results.
Submit another query.