DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-22C and si:dkey-187j14.6

DIOPT Version :9

Sequence 1:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_021333799.1 Gene:si:dkey-187j14.6 / 100006680 ZFINID:ZDB-GENE-131121-572 Length:148 Species:Danio rerio


Alignment Length:117 Identity:27/117 - (23%)
Similarity:38/117 - (32%) Gaps:31/117 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 EKNWSTASKTCRNMGGHLADIKDEADLAAI-KANLKEDTHYWLGI-------------NDLDHEG 204
            :|||:.|...||.....|..::.:.|...| ||....:...|:|:             .||    
Zfish    28 QKNWTEAQAFCREFYLDLPTVQTDDDRLEIQKALSGANPETWVGLYGSICVWRWSYRSQDL---- 88

  Fly   205 KFLSMPTGKQTTFLKWA-SGRPSQLDTLNCVFLYN-GEMYDYPCHYTFRFIC 254
                       .|..|| :..||......|..:.| |..|...|.....|:|
Zfish    89 -----------LFSAWALTEDPSPRTQSACAVIRNDGFWYATNCTQLKPFVC 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 27/117 (23%)
si:dkey-187j14.6XP_021333799.1 CLECT_1 23..131 CDD:153072 27/117 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.